C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanine nucleotide binding protein (G protein), beta polypeptide 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000884 Gnb1l 10090 + 16:18498768-18566679 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000904 Gnb1l-007 18498886-18566627 nonsense_mediated_decay
  ENSMUST00000090086 Gnb1l-001 18498888-18566679 protein_coding
  ENSMUST00000115600 Gnb1l-008 18498902-18564538 nonsense_mediated_decay
  ENSMUST00000115601 Gnb1l-009 18498888-18566679 protein_coding
  ENSMUST00000124924 Gnb1l-011 18498891-18552511 processed_transcript
  ENSMUST00000129952 Gnb1l-006 18498878-18552572 processed_transcript
  ENSMUST00000139625 Gnb1l-005 18498823-18552388 protein_coding
  ENSMUST00000147739 Gnb1l-003 18498897-18544225 protein_coding
  ENSMUST00000149035 Gnb1l-004 18498886-18552438 protein_coding
  ENSMUST00000151253 Gnb1l-012 18548743-18552584 processed_transcript
  ENSMUST00000167778 Gnb1l-201 18498768-18566679 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090086ENSMUST00000115600ENSMUST00000115601ENSMUST00000129952ENSMUST00000147739ENSMUST00000167778
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090086 N/A 0.702±0.23 0.369±0.00 0.234±0.00 N/A N/A N/A N/A 0.213±0.04 0.318±0.00 0.178±0.04 1.640±0.21 N/A N/A
ENSMUST00000115600 2.783±0.38 2.343±0.23 2.131±0.40 2.527±0.75 2.966±0.82 1.815±0.32 1.221±0.25 2.371±0.47 1.982±1.14 1.757±0.25 0.610±0.26 3.658±1.39 1.747±0.45 10.505±3.87
ENSMUST00000115601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A
ENSMUST00000129952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.922±0.00 3.231±0.00 N/A
ENSMUST00000147739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.623±0.00 N/A N/A N/A
ENSMUST00000167778 0.620±0.12 0.916±0.21 0.624±0.00 0.584±0.39 0.962±0.14 0.647±0.20 0.364±0.05 0.612±0.14 0.522±0.32 0.545±0.21 0.156±0.02 1.174±0.15 0.285±0.07 2.970±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684
CIL_0005F1 CIL_0005F1_0002 CGP 16:18498768-18566679

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0035176 IMP social behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036293 gnb1l guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein_coding Danio_rerio
ENSG00000185838 GNB1L guanine nucleotide binding protein (G protein), beta polypeptide 1-like protein_coding Homo_sapiens

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