C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein (G protein), beta polypeptide 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090086 Gnb1l-001 ENSMUSG00000000884 10090 + 16:18498888-18566679 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainLiverLungMuscleOvaryENSMUST00000090086
Transcript ID Adrenal Bladder Brain Liver Lung Muscle Ovary
ENSMUST00000090086 0.702±0.23 0.369±0.00 0.234±0.00 0.213±0.04 0.318±0.00 0.178±0.04 1.640±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684
CIL_0005F1 CIL_0005F1_0002 CGP 16:18498768-18566679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0035176 IMP social behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329517 GNB1L-001 protein_coding Homo_sapiens 0 839
ENST00000403325 GNB1L-003 protein_coding Homo_sapiens 0 839
ENST00000405009 GNB1L-005 protein_coding Homo_sapiens 0 523
ENST00000460402 GNB1L-002 processed_transcript Homo_sapiens 0 699
ENST00000481086 GNB1L-006 processed_transcript Homo_sapiens 0 488

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