C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 1 (neutral amino acid transporter), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001918 Slc1a5 10090 + 7:16781346-16798274 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108496 Slc1a5-001 16781346-16798257 protein_coding
  ENSMUST00000127401 Slc1a5-002 16781368-16798274 retained_intron
  ENSMUST00000131664 Slc1a5-004 16785666-16787168 retained_intron
  ENSMUST00000134407 Slc1a5-006 16793027-16796159 processed_transcript
  ENSMUST00000135817 Slc1a5-003 16784738-16793706 protein_coding
  ENSMUST00000141349 Slc1a5-007 16793177-16795943 retained_intron
  ENSMUST00000147814 Slc1a5-005 16786371-16793796 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108496ENSMUST00000127401ENSMUST00000134407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108496 358.767±260.38 50.235±17.03 30.081±5.59 2.188±1.59 192.155±14.62 26.808±6.82 8.048±2.49 12.027±4.16 13.791±10.93 33.267±8.27 4.135±1.70 27.898±9.21 14.992±12.07 2.849±1.20
ENSMUST00000127401 139.256±21.10 79.537±17.54 66.619±10.77 4.842±1.25 193.557±80.31 44.468±4.70 7.770±3.48 18.305±3.67 47.293±53.75 46.292±4.57 5.398±2.87 35.159±3.73 10.665±6.17 3.520±1.03
ENSMUST00000134407 N/A N/A N/A N/A N/A N/A N/A N/A 0.767±0.10 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006835 IEA dicarboxylic acid transport
GO:0006860 IEA extracellular amino acid transport
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0015175 IDA neutral amino acid transmembrane transporter activity
GO:0015194 IEA L-serine transmembrane transporter activity
GO:0015804 IDA neutral amino acid transport
GO:0015825 IEA L-serine transport
GO:0016020 IEA membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016465 slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 protein_coding Danio_rerio
ENSDARG00000090706 slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 protein_coding Danio_rerio
ENSG00000105281 SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 protein_coding Homo_sapiens

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