C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 1 (neutral amino acid transporter), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105281 SLC1A5 9606 - 19:46774883-46788594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000412532 SLC1A5-005 46774924-46787342 protein_coding
  ENST00000434726 SLC1A5-004 46774885-46784824 protein_coding
  ENST00000542575 SLC1A5-001 46774883-46788594 protein_coding
  ENST00000593713 SLC1A5-007 46777211-46784786 protein_coding
  ENST00000594991 SLC1A5-003 46774885-46784905 protein_coding
  ENST00000598022 SLC1A5-006 46782436-46784803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000412532ENST00000434726ENST00000542575
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000412532 24.358±0.00 N/A 3.709±0.00 26.561±15.33 14.031±5.06 5.177±3.99 24.690±0.00 12.968±0.00 28.821±22.72 1.280±0.00 61.284±48.55 98.514±23.49 69.732±16.27
ENST00000434726 N/A 35.459±0.00 N/A N/A 10.128±4.30 N/A 1.736±0.00 N/A N/A N/A 52.103±0.00 N/A N/A
ENST00000542575 23.680±0.00 18.133±0.00 2.172±0.00 18.973±14.04 11.655±0.00 N/A 10.834±0.00 N/A 20.289±0.00 N/A 18.014±12.85 21.867±1.49 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044E CIL_00044E_0003 CGP 19:46719507-46776988
CIL_00044D CIL_00044D_0003 CGP 19:46746046-46788594

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001618 IEA virus receptor activity
GO:0003333 IEA amino acid transmembrane transport
GO:0004872 TAS receptor activity
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006811 TAS ion transport
GO:0006835 IEA dicarboxylic acid transport
GO:0006860 IEA extracellular amino acid transport
GO:0006865 TAS amino acid transport
GO:0006868 TAS glutamine transport
GO:0009615 IEA response to virus
GO:0015171 IEA amino acid transmembrane transporter activity
GO:0015175 TAS neutral amino acid transmembrane transporter activity
GO:0015186 TAS L-glutamine transmembrane transporter activity
GO:0015194 IEA L-serine transmembrane transporter activity
GO:0015804 TAS neutral amino acid transport
GO:0015825 IEA L-serine transport
GO:0016020 IEA:IDA membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016465 slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 protein_coding Danio_rerio
ENSDARG00000090706 slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 protein_coding Danio_rerio
ENSMUSG00000001918 Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 protein_coding Mus_musculus

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