C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 97
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002608 Ccdc97 10090 - 7:25711106-25719088 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002683 Ccdc97-001 25711106-25719088 protein_coding
  ENSMUST00000125699 Ccdc97-006 25714822-25719045 processed_transcript
  ENSMUST00000129429 Ccdc97-005 25716141-25719055 processed_transcript
  ENSMUST00000129519 Ccdc97-009 25714910-25716394 retained_intron
  ENSMUST00000134201 Ccdc97-003 25712935-25716106 processed_transcript
  ENSMUST00000137046 Ccdc97-007 25715904-25719006 processed_transcript
  ENSMUST00000140847 Ccdc97-004 25716906-25719067 processed_transcript
  ENSMUST00000154143 Ccdc97-002 25714134-25719003 retained_intron
  ENSMUST00000156365 Ccdc97-008 25715904-25718991 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002683ENSMUST00000134201
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002683 10.639±0.68 20.150±5.51 16.984±0.19 18.131±6.12 15.638±3.69 19.765±4.88 14.171±5.18 13.944±2.19 9.963±2.00 16.725±4.90 9.983±2.20 25.022±12.00 8.999±4.59 17.176±7.69
ENSMUST00000134201 N/A N/A N/A 18.638±0.00 N/A N/A N/A N/A N/A N/A N/A 19.913±0.00 17.956±0.00 40.854±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TR CIL_0008TR_0002 VISTA 7:25324415-25925712
CIL_00078X CIL_00078X_0002 CGP 7:25687002-25719088

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074703 CCDC97 coiled-coil domain containing 97 protein_coding Danio_rerio
ENSG00000142039 CCDC97 coiled-coil domain containing 97 protein_coding Homo_sapiens

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