C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00078X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105329-ENSG00000105329 CGP 9606 19:41301587-41353911
GeneTranscriptPositionBiotype
ENSG00000105329 (TGFB1)
transforming growth factor, beta 1 		ENST00000221930 (TGFB1-001) 41330323-41353911 protein_coding
ENST00000597453 (TGFB1-002) 41342021-41348341 retained_intron
ENST00000598758 (TGFB1-004) 41301587-41342030 protein_coding
ENST00000600196 (TGFB1-003) 41332055-41344840 retained_intron
ENSG00000142039 (CCDC97)
coiled-coil domain containing 97 		ENST00000269967 (CCDC97-001) 41310189-41324883 protein_coding
ENST00000596882 (CCDC97-002) 41310801-41316581 protein_coding
ENST00000600918 (CCDC97-003) 41319733-41320754 protein_coding
ENSG00000255730 (CTC-435M10.3)
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial {ECO:0000313|Ensembl:ENSP00000471150}; Uncharacterized protein {ECO: 		ENST00000540732 (CTC-435M10.3-001) 41376757-41425001 protein_coding
ENST00000604424 (CTC-435M10.3-002) 41350853-41410853 processed_transcript
CIL_00078X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002603-ENSMUSG00000002608 CGP 10090 7:25687002-25719088
GeneTranscriptPositionBiotype
ENSMUSG00000002603 (Tgfb1)
transforming growth factor, beta 1 		ENSMUST00000002678 (Tgfb1-001) 25687002-25705077 protein_coding
ENSMUST00000169009 (Tgfb1-003) 25688927-25697213 nonsense_mediated_decay
ENSMUST00000171757 (Tgfb1-002) 25692418-25697174 retained_intron
ENSMUSG00000002608 (Ccdc97)
coiled-coil domain containing 97 		ENSMUST00000002683 (Ccdc97-001) 25711106-25719088 protein_coding
ENSMUST00000125699 (Ccdc97-006) 25714822-25719045 processed_transcript
ENSMUST00000129429 (Ccdc97-005) 25716141-25719055 processed_transcript
ENSMUST00000129519 (Ccdc97-009) 25714910-25716394 retained_intron
ENSMUST00000134201 (Ccdc97-003) 25712935-25716106 processed_transcript
ENSMUST00000137046 (Ccdc97-007) 25715904-25719006 processed_transcript
ENSMUST00000140847 (Ccdc97-004) 25716906-25719067 processed_transcript
ENSMUST00000154143 (Ccdc97-002) 25714134-25719003 retained_intron
ENSMUST00000156365 (Ccdc97-008) 25715904-25718991 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078X_0001ENSG00000105329ENST00000221930ENST00000597453ENST00000598758ENST00000600196ENSG00000142039ENST00000269967ENST00000596882ENST00000600918ENSG00000255730ENST00000540732ENST00000604424CIL_00078X_0002ENSMUSG00000002603ENSMUST00000002678ENSMUST00000169009ENSMUST00000171757ENSMUSG00000002608ENSMUST00000002683ENSMUST00000125699ENSMUST00000129429ENSMUST00000129519ENSMUST00000134201ENSMUST00000137046ENSMUST00000140847ENSMUST00000154143ENSMUST00000156365
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078X_0001ENSG00000105329ENST00000221930ENST00000598758ENSG00000142039ENST00000269967ENST00000596882ENSG00000255730ENST00000540732CIL_00078X_0002ENSMUSG00000002603ENSMUST00000002678ENSMUST00000169009ENSMUST00000171757ENSMUSG00000002608ENSMUST00000002683ENSMUST00000134201
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105329 ENST00000221930 N/A N/A 2.823±0.00 N/A 19.971±0.00 23.032±0.00 N/A N/A N/A 3.527±0.00 N/A 45.467±10.33 59.302±10.62 N/A
ENST00000597453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.713±0.00 N/A 121.620±0.00
ENST00000600196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000142039 ENST00000269967 7.569±0.00 12.564±0.00 N/A 2.934±1.89 5.122±3.09 4.269±2.85 2.709±2.26 3.061±2.53 1.874±0.19 2.579±0.74 4.833±4.58 10.949±9.85 7.839±2.09 14.724±1.44
ENST00000596882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.011±0.00
ENST00000600918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255730 ENST00000540732 N/A N/A 2.992±0.00 N/A 2.885±0.00 N/A 2.679±0.00 N/A N/A 7.011±4.58 N/A 23.075±0.00 22.568±3.38 N/A
ENST00000604424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002603 ENSMUST00000002678 15.242±3.61 17.682±2.15 10.063±1.87 1.713±0.44 28.483±13.52 9.371±2.15 7.312±2.23 8.267±0.94 8.356±7.35 26.007±1.41 1.587±0.78 17.351±2.83 9.424±2.46 2.161±0.94
ENSMUST00000169009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.604±0.00 0.482±0.00
ENSMUST00000171757 N/A N/A N/A 4.329±0.00 N/A N/A N/A N/A N/A N/A N/A 40.803±0.00 39.703±1.13 1.951±0.00
ENSMUSG00000002608 ENSMUST00000002683 10.639±0.68 20.150±5.51 16.984±0.19 18.131±6.12 15.638±3.69 19.765±4.88 14.171±5.18 13.944±2.19 9.963±2.00 16.725±4.90 9.983±2.20 25.022±12.00 8.999±4.59 17.176±7.69
ENSMUST00000125699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134201 N/A N/A N/A 18.638±0.00 N/A N/A N/A N/A N/A N/A N/A 19.913±0.00 17.956±0.00 40.854±0.00
ENSMUST00000137046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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