C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein, adipocyte asscociated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002871 Tpra1 10090 + 6:88902251-88912238 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055022 Tpra1-001 88902251-88912238 protein_coding
  ENSMUST00000123257 Tpra1-015 88907989-88910842 processed_transcript
  ENSMUST00000128171 Tpra1-005 88908188-88909527 protein_coding
  ENSMUST00000128790 Tpra1-016 88906041-88910617 processed_transcript
  ENSMUST00000129979 Tpra1-002 88907975-88912238 processed_transcript
  ENSMUST00000135778 Tpra1-010 88902364-88910227 processed_transcript
  ENSMUST00000138415 Tpra1-006 88902299-88909414 processed_transcript
  ENSMUST00000141163 Tpra1-007 88902317-88906564 processed_transcript
  ENSMUST00000144405 Tpra1-009 88905634-88909301 processed_transcript
  ENSMUST00000148874 Tpra1-013 88910158-88911778 retained_intron
  ENSMUST00000150236 Tpra1-003 88907975-88911984 processed_transcript
  ENSMUST00000151379 Tpra1-011 88905955-88907760 processed_transcript
  ENSMUST00000152045 Tpra1-012 88908258-88910576 retained_intron
  ENSMUST00000152585 Tpra1-014 88906041-88910648 processed_transcript
  ENSMUST00000153874 Tpra1-008 88902453-88909759 protein_coding
  ENSMUST00000153885 Tpra1-004 88908188-88909532 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055022ENSMUST00000129979ENSMUST00000150236ENSMUST00000152585
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055022 36.052±0.51 120.994±13.46 30.987±2.94 15.907±11.17 42.391±10.00 46.465±2.55 24.113±1.91 40.475±5.13 21.104±10.34 53.554±3.00 9.288±1.53 62.506±17.48 20.867±10.60 5.158±0.52
ENSMUST00000129979 N/A 44.538±0.76 N/A 2.834±0.00 N/A N/A N/A N/A 5.616±1.25 N/A N/A 6.798±2.20 6.416±2.19 0.261±0.00
ENSMUST00000150236 N/A N/A N/A 1.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.673±1.46 0.106±0.00
ENSMUST00000152585 N/A N/A N/A N/A 19.693±0.00 N/A N/A N/A N/A N/A N/A 13.943±2.63 2.313±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EC CIL_0008EC_0002 VISTA 6:88734676-89336253

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054930 tpra1 transmembrane protein, adipocyte asscociated 1 protein_coding Danio_rerio
ENSG00000163870 TPRA1 transmembrane protein, adipocyte asscociated 1 protein_coding Homo_sapiens

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