C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein, adipocyte asscociated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055022 Tpra1-001 ENSMUSG00000002871 10090 + 6:88902251-88912238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055022
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055022 36.052±0.51 120.994±13.46 30.987±2.94 15.907±11.17 42.391±10.00 46.465±2.55 24.113±1.91 40.475±5.13 21.104±10.34 53.554±3.00 9.288±1.53 62.506±17.48 20.867±10.60 5.158±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EC CIL_0008EC_0002 VISTA 6:88734676-89336253

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296210 TPRA1-003 protein_coding Homo_sapiens 0 684
ENST00000355552 TPRA1-001 protein_coding Homo_sapiens 0 1230
ENST00000393400 TPRA1-002 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000450633 TPRA1-006 protein_coding Homo_sapiens 0 1230
ENST00000469111 TPRA1-010 protein_coding Homo_sapiens 0 684
ENST00000483868 TPRA1-004 nonsense_mediated_decay Homo_sapiens 0 749
ENST00000489960 TPRA1-005 protein_coding Homo_sapiens 0 1230
ENST00000490290 TPRA1-009 protein_coding Homo_sapiens 0 688
ENST00000490643 TPRA1-007 protein_coding Homo_sapiens 0 547

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