C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ets variant 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003382 Etv3 10090 + 3:87525407-87540156 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117293 Etv3-003 87525614-87531031 protein_coding
  ENSMUST00000119109 Etv3-001 87525407-87540156 protein_coding
  ENSMUST00000136680 Etv3-002 87525607-87540156 retained_intron
  ENSMUST00000152010 Etv3-004 87525618-87531034 retained_intron
  ENSMUST00000170036 Etv3-201 87525578-87540142 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119109ENSMUST00000136680ENSMUST00000170036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119109 2.228±0.64 1.450±0.00 2.173±0.51 1.093±0.18 2.052±0.00 2.091±0.46 1.556±0.50 1.114±0.17 0.776±0.29 2.510±0.86 0.670±0.34 1.402±0.19 1.410±0.32 0.781±0.38
ENSMUST00000136680 0.916±0.00 N/A N/A 0.368±0.02 2.181±0.07 1.767±0.22 N/A 0.370±0.00 0.289±0.02 1.174±0.19 N/A 0.874±0.21 N/A N/A
ENSMUST00000170036 4.786±1.19 7.170±1.70 5.924±0.32 1.872±0.17 8.705±4.11 10.443±1.19 2.763±0.68 3.432±0.31 2.000±0.69 7.610±1.52 2.180±0.39 3.913±1.86 3.843±2.09 1.080±0.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0017053 IDA transcriptional repressor complex
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117036 ETV3 ets variant 3 protein_coding Homo_sapiens

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