C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ets variant 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119109 Etv3-001 ENSMUSG00000003382 10090 + 3:87525407-87540156 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119109 2.228±0.64 1.450±0.00 2.173±0.51 1.093±0.18 2.052±0.00 2.091±0.46 1.556±0.50 1.114±0.17 0.776±0.29 2.510±0.86 0.670±0.34 1.402±0.19 1.410±0.32 0.781±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0017053 IDA transcriptional repressor complex
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000140347 erf-001 protein_coding Danio_rerio 0 265
ENSDART00000092656 erf-201 protein_coding Danio_rerio 0 261
ENSDART00000124247 erfl1-201 protein_coding Danio_rerio 3e-39 169
ENSDART00000146214 erfl1-001 protein_coding Danio_rerio 3e-39 169
ENST00000326786 ETV3-001 protein_coding Homo_sapiens 0 717
ENST00000368192 ETV3-002 protein_coding Homo_sapiens 0 1757
ENST00000454449 ETV3L-001 protein_coding Homo_sapiens 0 449
ENST00000460850 ETV3-003 processed_transcript Homo_sapiens 0 459

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