C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Tax1 (human T cell leukemia virus type I) binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004535 Tax1bp1 10090 + 6:52713729-52766780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080723 Tax1bp1-001 52713729-52766780 protein_coding
  ENSMUST00000128173 Tax1bp1-002 52713763-52731543 processed_transcript
  ENSMUST00000129660 Tax1bp1-005 52714350-52727299 protein_coding
  ENSMUST00000138040 Tax1bp1-004 52714219-52733255 protein_coding
  ENSMUST00000147513 Tax1bp1-006 52740877-52742804 processed_transcript
  ENSMUST00000149586 Tax1bp1-007 52757475-52758825 retained_intron
  ENSMUST00000149588 Tax1bp1-003 52713750-52733221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080723ENSMUST00000129660ENSMUST00000138040ENSMUST00000149588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080723 23.663±1.83 8.809±2.85 51.484±0.25 30.974±14.86 21.161±4.10 34.833±3.01 14.541±1.04 37.489±2.49 22.787±7.76 29.578±3.25 11.981±3.33 24.372±21.39 62.759±22.39 54.208±4.83
ENSMUST00000129660 N/A 9.594±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.658±2.13
ENSMUST00000149588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.594±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003ZJ CIL_0003ZJ_0002 CGP 6:52546228-52766780
CIL_00091R CIL_00091R_0002 VISTA 6:52667026-53269651
CIL_0003ZI CIL_0003ZI_0002 CGP 6:52713729-53068631

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006915 IEA apoptotic process
GO:0019900 IPI kinase binding
GO:0032088 IMP negative regulation of NF-kappaB transcription factor activity
GO:0043066 IEA negative regulation of apoptotic process
GO:0043130 NAS ubiquitin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034062 tax1bp1a Tax1 (human T-cell leukemia virus type I) binding protein 1a protein_coding Danio_rerio
ENSDARG00000056856 tax1bp1b Tax1 (human T-cell leukemia virus type I) binding protein 1b protein_coding Danio_rerio
ENSG00000106052 TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 protein_coding Homo_sapiens

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