C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Tax1 (human T-cell leukemia virus type I) binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106052 TAX1BP1 9606 + 7:27739331-27844564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265393 TAX1BP1-001 27740095-27828881 protein_coding
  ENST00000396319 TAX1BP1-002 27740189-27829263 protein_coding
  ENST00000409980 TAX1BP1-008 27740142-27828881 protein_coding
  ENST00000416801 TAX1BP1-006 27740147-27828864 nonsense_mediated_decay
  ENST00000418691 TAX1BP1-003 27739331-27765982 protein_coding
  ENST00000422800 TAX1BP1-004 27739602-27765864 protein_coding
  ENST00000433216 TAX1BP1-201 27740095-27829765 protein_coding
  ENST00000457186 TAX1BP1-009 27793138-27829022 protein_coding
  ENST00000460059 TAX1BP1-011 27828700-27833151 processed_transcript
  ENST00000488564 TAX1BP1-010 27827801-27844564 protein_coding
  ENST00000490455 TAX1BP1-005 27740169-27758351 retained_intron
  ENST00000494033 TAX1BP1-007 27769678-27772539 processed_transcript
  ENST00000543117 TAX1BP1-202 27739373-27829765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265393ENST00000396319ENST00000416801ENST00000433216ENST00000457186ENST00000543117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265393 8.001±0.00 5.603±0.00 2.585±0.00 6.718±0.82 6.576±1.94 10.046±1.77 11.552±7.00 5.930±0.00 N/A 9.916±0.46 0.673±0.00 11.815±7.09 14.106±9.40 50.002±0.00
ENST00000396319 7.254±0.00 3.982±0.00 2.346±0.00 10.004±4.52 4.447±0.80 7.971±5.26 11.853±9.08 12.588±10.71 4.778±2.68 10.434±6.55 9.923±7.60 9.505±0.28 9.830±2.43 18.355±0.00
ENST00000416801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.973±0.00 15.183±0.00 22.195±0.00 31.947±0.00
ENST00000433216 5.312±0.00 5.956±0.00 N/A 12.785±0.00 2.493±0.00 8.018±6.07 N/A 18.225±0.00 3.767±0.72 4.502±1.96 N/A 8.935±0.78 9.853±2.74 6.666±0.00
ENST00000457186 N/A N/A N/A N/A N/A N/A N/A N/A 6.945±0.00 N/A N/A N/A N/A N/A
ENST00000543117 N/A N/A N/A N/A 3.332±0.00 1.718±0.00 N/A 3.057±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZJ CIL_0003ZJ_0001 CGP 7:27525442-27844564
CIL_0003ZI CIL_0003ZI_0001 CGP 7:27739331-28180743

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006915 IEA apoptotic process
GO:0019900 ISS kinase binding
GO:0032088 ISS negative regulation of NF-kappaB transcription factor activity
GO:0032480 TAS negative regulation of type I interferon production
GO:0043066 IEA negative regulation of apoptotic process
GO:0045087 TAS innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034062 tax1bp1a Tax1 (human T-cell leukemia virus type I) binding protein 1a protein_coding Danio_rerio
ENSDARG00000056856 tax1bp1b Tax1 (human T-cell leukemia virus type I) binding protein 1b protein_coding Danio_rerio
ENSMUSG00000004535 Tax1bp1 Tax1 (human T cell leukemia virus type I) binding protein 1 protein_coding Mus_musculus

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