C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 130
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004994 Ccdc130 10090 - 8:84257795-84270380 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005120 Ccdc130-002 84258301-84270347 protein_coding
  ENSMUST00000098578 Ccdc130-001 84257795-84270380 protein_coding
  ENSMUST00000163993 Ccdc130-004 84263906-84270370 protein_coding
  ENSMUST00000164476 Ccdc130-003 84258302-84261906 retained_intron
  ENSMUST00000166285 Ccdc130-007 84260396-84262145 retained_intron
  ENSMUST00000166728 Ccdc130-005 84264181-84270367 retained_intron
  ENSMUST00000172320 Ccdc130-006 84259115-84266838 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005120ENSMUST00000098578ENSMUST00000163993ENSMUST00000164476ENSMUST00000166285ENSMUST00000166728ENSMUST00000172320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005120 2.330±0.35 1.186±0.37 1.520±0.54 3.953±1.65 1.554±0.95 2.323±0.97 1.500±0.14 2.057±0.20 1.303±0.50 1.595±0.17 1.493±0.50 3.033±1.56 6.112±3.15 7.340±3.12
ENSMUST00000098578 1.223±0.41 0.985±0.21 1.049±0.00 1.469±0.66 1.017±0.18 1.249±0.28 0.462±0.15 0.581±0.07 0.615±0.38 1.353±0.32 0.434±0.17 2.260±1.19 1.056±0.20 5.531±1.16
ENSMUST00000163993 N/A N/A N/A N/A 14.072±1.78 15.094±6.81 6.211±0.91 10.631±1.15 3.932±0.00 18.507±1.83 N/A 25.335±7.45 N/A N/A
ENSMUST00000164476 1.768±0.00 3.181±1.21 2.372±0.64 3.197±1.44 2.442±0.35 2.468±0.64 1.308±0.15 1.441±0.00 1.343±0.48 1.936±0.78 1.062±0.36 5.361±2.25 4.408±2.31 9.927±7.58
ENSMUST00000166285 N/A 1.996±0.27 N/A N/A 1.661±0.07 N/A N/A N/A N/A N/A N/A 3.113±0.00 N/A N/A
ENSMUST00000166728 N/A 4.666±0.00 N/A N/A N/A N/A N/A N/A N/A 6.455±0.00 N/A 8.768±0.00 N/A N/A
ENSMUST00000172320 N/A N/A N/A 4.428±0.00 N/A N/A N/A N/A N/A N/A 0.751±0.00 4.513±0.00 N/A 14.247±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009615 IEA response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041533 ccdc130 coiled-coil domain containing 130 protein_coding Danio_rerio
ENSG00000104957 CCDC130 coiled-coil domain containing 130 protein_coding Homo_sapiens

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