C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 130
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104957 CCDC130 9606 + 19:13731760-13763296 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221554 CCDC130-004 13747779-13763292 protein_coding
  ENST00000540216 CCDC130-002 13731760-13759121 retained_intron
  ENST00000585844 CCDC130-010 13759111-13763023 protein_coding
  ENST00000586600 CCDC130-001 13731760-13763296 protein_coding
  ENST00000586666 CCDC130-007 13747897-13762736 protein_coding
  ENST00000587019 CCDC130-011 13759076-13762931 processed_transcript
  ENST00000587098 CCDC130-005 13731762-13732602 retained_intron
  ENST00000588071 CCDC130-006 13731767-13759153 retained_intron
  ENST00000588809 CCDC130-008 13756208-13759478 protein_coding
  ENST00000589096 CCDC130-009 13758908-13759627 protein_coding
  ENST00000589669 CCDC130-012 13761391-13762973 protein_coding
  ENST00000593174 CCDC130-003 13747864-13763279 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221554ENST00000540216ENST00000586600ENST00000586666ENST00000588071ENST00000588809ENST00000589096ENST00000589669ENST00000593174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221554 2.475±0.00 8.089±0.00 N/A 3.780±2.73 5.707±0.00 4.314±0.00 3.693±0.00 6.287±0.00 3.720±0.00 10.597±0.00 12.731±0.00 11.306±6.11 9.658±3.53 14.622±3.44
ENST00000540216 N/A N/A N/A N/A N/A N/A 0.667±0.00 N/A N/A N/A 1.236±0.00 N/A N/A N/A
ENST00000586600 N/A N/A N/A N/A N/A N/A N/A 2.258±0.00 N/A N/A N/A N/A N/A N/A
ENST00000586666 N/A N/A 8.391±0.00 4.963±0.00 2.037±0.00 2.008±0.00 1.376±0.00 1.390±0.00 4.323±0.00 5.200±0.00 6.850±0.00 4.545±0.00 2.769±0.00 N/A
ENST00000588071 N/A N/A N/A 1.785±0.00 N/A 1.782±0.00 N/A 1.025±0.00 N/A N/A N/A 2.310±0.00 N/A N/A
ENST00000588809 N/A N/A 5.536±0.00 N/A N/A N/A N/A N/A N/A 4.815±0.00 5.710±0.00 2.674±0.00 N/A N/A
ENST00000589096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.273±0.00 N/A N/A
ENST00000589669 N/A 13.211±0.00 N/A 7.192±0.00 N/A N/A 2.900±0.00 N/A N/A N/A 3.672±0.00 12.691±0.00 N/A N/A
ENST00000593174 3.434±0.00 8.556±0.00 N/A N/A 8.104±0.00 3.697±3.11 1.452±0.00 7.159±0.00 1.268±0.00 5.111±0.00 N/A 15.884±0.18 7.544±0.00 3.273±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0009615 IEP response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041533 ccdc130 coiled-coil domain containing 130 protein_coding Danio_rerio
ENSMUSG00000004994 Ccdc130 coiled-coil domain containing 130 protein_coding Mus_musculus

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