C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 2 (facilitated glucose transporter), member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005107 Slc2a9 10090 - 5:38349273-38503143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005238 Slc2a9-002 38349306-38502152 protein_coding
  ENSMUST00000067872 Slc2a9-201 38349273-38483385 protein_coding
  ENSMUST00000067886 Slc2a9-003 38349273-38480306 protein_coding
  ENSMUST00000122970 Slc2a9-004 38349639-38480158 nonsense_mediated_decay
  ENSMUST00000129099 Slc2a9-009 38349274-38491957 protein_coding
  ENSMUST00000140462 Slc2a9-007 38476332-38502161 processed_transcript
  ENSMUST00000143758 Slc2a9-005 38351083-38480131 protein_coding
  ENSMUST00000144290 Slc2a9-012 38415440-38440829 processed_transcript
  ENSMUST00000147664 Slc2a9-008 38440650-38502079 protein_coding
  ENSMUST00000155634 Slc2a9-006 38349639-38503143 protein_coding
  ENSMUST00000156076 Slc2a9-010 38482992-38491930 retained_intron
  ENSMUST00000156272 Slc2a9-011 38382057-38480182 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005238ENSMUST00000067872ENSMUST00000067886ENSMUST00000122970ENSMUST00000129099ENSMUST00000140462ENSMUST00000143758ENSMUST00000144290ENSMUST00000155634ENSMUST00000156272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.224±0.00 N/A N/A N/A
ENSMUST00000067872 N/A 0.255±0.09 N/A 0.052±0.01 N/A N/A N/A N/A N/A N/A 0.094±0.00 0.303±0.14 0.151±0.00 0.042±0.00
ENSMUST00000067886 0.906±0.28 0.223±0.00 1.240±0.20 0.088±0.05 0.795±0.35 0.569±0.28 0.321±0.10 1.468±0.18 0.533±0.20 1.415±0.17 0.135±0.04 0.458±0.15 0.073±0.01 N/A
ENSMUST00000122970 0.604±0.00 N/A N/A 0.021±0.00 0.500±0.08 0.432±0.06 N/A 0.593±0.02 N/A 0.653±0.00 0.155±0.00 0.365±0.10 0.119±0.07 0.184±0.00
ENSMUST00000129099 N/A N/A N/A N/A N/A N/A N/A 1.272±0.37 5.021±2.75 N/A N/A N/A N/A N/A
ENSMUST00000140462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A 0.508±0.04 N/A
ENSMUST00000143758 0.370±0.00 0.960±0.28 N/A 0.138±0.00 0.906±0.18 0.743±0.28 0.247±0.07 2.060±0.00 6.313±1.15 1.304±0.34 N/A 0.539±0.21 0.298±0.15 0.122±0.00
ENSMUST00000144290 N/A 0.650±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.930±0.16 N/A N/A
ENSMUST00000155634 N/A 0.292±0.10 N/A N/A 0.358±0.04 0.766±0.16 0.139±0.06 0.891±0.00 3.224±0.84 0.509±0.15 N/A 0.541±0.25 0.060±0.00 0.156±0.00
ENSMUST00000156272 N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QQ CIL_0008QQ_0002 VISTA 5:37760247-38361421
CIL_00096M CIL_00096M_0002 VISTA 5:37765055-38366694
CIL_0008ZA CIL_0008ZA_0002 VISTA 5:37806142-38406996
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005355 IDA glucose transmembrane transporter activity
GO:0005635 IDA nuclear envelope
GO:0005886 IDA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0015758 IDA glucose transport
GO:0046415 IEA urate metabolic process
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029894 slc2a15a solute carrier family 2 (facilitated glucose transporter), member 15a protein_coding Danio_rerio
ENSDARG00000053269 slc2a15b solute carrier family 2 (facilitated glucose transporter), member 15b protein_coding Danio_rerio
ENSG00000109667 SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 protein_coding Homo_sapiens

Loading