C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 2 (facilitated glucose transporter), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122970 Slc2a9-004 ENSMUSG00000005107 10090 - 5:38349639-38480158 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENSMUST00000122970
Transcript ID Adipose Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000122970 0.604±0.00 0.021±0.00 0.500±0.08 0.432±0.06 0.593±0.02 0.653±0.00 0.155±0.00 0.365±0.10 0.119±0.07 0.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QQ CIL_0008QQ_0002 VISTA 5:37760247-38361421
CIL_00096M CIL_00096M_0002 VISTA 5:37765055-38366694
CIL_0008ZA CIL_0008ZA_0002 VISTA 5:37806142-38406996
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005355 IDA glucose transmembrane transporter activity
GO:0005635 IDA nuclear envelope
GO:0005886 IDA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0015758 IDA glucose transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264784 SLC2A9-002 protein_coding Homo_sapiens 0 662
ENST00000309065 SLC2A9-201 protein_coding Homo_sapiens 0 656
ENST00000505104 SLC2A9-004 processed_transcript Homo_sapiens 0 656
ENST00000505506 SLC2A9-007 processed_transcript Homo_sapiens 0 254
ENST00000506583 SLC2A9-001 protein_coding Homo_sapiens 0 656
ENST00000513129 SLC2A9-006 protein_coding Homo_sapiens 0 540

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