C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sulfide quinone reductase-like (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005803 Sqrdl 10090 + 2:122765237-122809569 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005953 Sqrdl-001 122765237-122809569 protein_coding
  ENSMUST00000110506 Sqrdl-002 122781999-122809553 protein_coding
  ENSMUST00000124460 Sqrdl-003 122765389-122785088 protein_coding
  ENSMUST00000126403 Sqrdl-008 122784961-122809338 nonsense_mediated_decay
  ENSMUST00000141698 Sqrdl-005 122765409-122768543 processed_transcript
  ENSMUST00000147310 Sqrdl-007 122784944-122788018 processed_transcript
  ENSMUST00000147475 Sqrdl-004 122765391-122785095 protein_coding
  ENSMUST00000176343 Sqrdl-009 122799762-122809559 protein_coding
  ENSMUST00000176999 Sqrdl-006 122771718-122800762 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005953ENSMUST00000147310ENSMUST00000176343
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005953 25.874±5.70 24.439±14.40 31.460±2.33 0.582±0.35 16.585±5.00 107.528±37.87 9.848±1.67 36.414±2.35 36.933±35.81 19.347±1.49 14.759±1.15 8.363±6.06 2.641±1.90 N/A
ENSMUST00000147310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 116.640±14.98
ENSMUST00000176343 N/A N/A N/A 0.994±0.00 N/A N/A N/A N/A N/A N/A N/A 15.997±0.00 1.771±0.85 132.880±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NC CIL_0004NC_0002 CGP 2:122738503-122809569

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process
GO:0070221 ISS sulfide oxidation, using sulfide:quinone oxidoreductase
GO:0070224 ISS sulfide:quinone oxidoreductase activity
GO:0070813 ISS hydrogen sulfide metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017034 sqrdl sulfide quinone reductase-like (yeast) protein_coding Danio_rerio
ENSG00000137767 SQRDL sulfide quinone reductase-like (yeast) protein_coding Homo_sapiens
ENSG00000260170 RP11-96O20.4 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000455047} protein_coding Homo_sapiens

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