C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0004NC_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000104164-ENSG00000260170 | CGP | 9606 | 15:45587123-45676314  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000104164  (BLOC1S6)biogenesis of lysosomal organelles complex-1, subunit 6, pallidin |
ENST00000220531 (BLOC1S6-001)
|
45587123-45609711 | protein_coding | |
|
ENST00000562384 (BLOC1S6-007)
|
45587352-45606527 | protein_coding | ||
|
ENST00000563000 (BLOC1S6-013)
|
45587560-45606692 | processed_transcript | ||
|
ENST00000563160 (BLOC1S6-016)
|
45587746-45606695 | processed_transcript | ||
|
ENST00000564310 (BLOC1S6-020)
|
45592124-45615999 | nonsense_mediated_decay | ||
|
ENST00000564765 (BLOC1S6-019)
|
45587825-45606818 | protein_coding | ||
|
ENST00000565216 (BLOC1S6-012)
|
45587424-45606671 | protein_coding | ||
|
ENST00000565323 (BLOC1S6-015)
|
45587617-45606585 | protein_coding | ||
|
ENST00000565409 (BLOC1S6-018)
|
45587785-45606601 | protein_coding | ||
|
ENST00000565727 (BLOC1S6-017)
|
45587772-45606801 | processed_transcript | ||
|
ENST00000566184 (BLOC1S6-011)
|
45587379-45605773 | retained_intron | ||
|
ENST00000566753 (BLOC1S6-002)
|
45587355-45599562 | protein_coding | ||
|
ENST00000566801 (BLOC1S6-014)
|
45587590-45605470 | protein_coding | ||
|
ENST00000567461 (BLOC1S6-006)
|
45587236-45606981 | protein_coding | ||
|
ENST00000567523 (BLOC1S6-003)
|
45587379-45607773 | nonsense_mediated_decay | ||
|
ENST00000567740 (BLOC1S6-005)
|
45587214-45607046 | processed_transcript | ||
|
ENST00000568597 (BLOC1S6-010)
|
45587376-45606607 | nonsense_mediated_decay | ||
|
ENST00000568816 (BLOC1S6-004)
|
45587591-45609710 | protein_coding | ||
|
ENST00000568963 (BLOC1S6-008)
|
45587352-45606529 | nonsense_mediated_decay | ||
|
ENST00000569076 (BLOC1S6-009)
|
45587353-45606486 | protein_coding | ||
|
ENSG00000137767 (SQRDL) sulfide quinone reductase-like (yeast) |
ENST00000260324 (SQRDL-001)
|
45634740-45691294 | protein_coding | |
|
ENST00000561493 (SQRDL-008)
|
45645881-45669946 | protein_coding | ||
|
ENST00000561735 (SQRDL-005)
|
45634721-45669944 | protein_coding | ||
|
ENST00000563296 (SQRDL-004)
|
45631584-45659037 | protein_coding | ||
|
ENST00000565227 (SQRDL-003)
|
45631578-45659142 | protein_coding | ||
|
ENST00000565997 (SQRDL-006)
|
45682540-45689414 | protein_coding | ||
|
ENST00000566934 (SQRDL-007)
|
45659081-45674017 | protein_coding | ||
|
ENST00000568606 (SQRDL-002)
|
45631148-45691280 | protein_coding | ||
|
ENSG00000200419 (Y_RNA) Y RNA |
ENST00000363549 (Y_RNA.1-346)
|
45591984-45592085 | misc_RNA | |
| CIL_0004NC_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000005804-ENSMUSG00000005803 | CGP | 10090 | 2:122738503-122809569 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000005803 (Sqrdl) sulfide quinone reductase-like (yeast) |
ENSMUST00000005953 (Sqrdl-001)
|
122765237-122809569 | protein_coding | |
|
ENSMUST00000110506 (Sqrdl-002)
|
122781999-122809553 | protein_coding | ||
|
ENSMUST00000124460 (Sqrdl-003)
|
122765389-122785088 | protein_coding | ||
|
ENSMUST00000126403 (Sqrdl-008)
|
122784961-122809338 | nonsense_mediated_decay | ||
|
ENSMUST00000141698 (Sqrdl-005)
|
122765409-122768543 | processed_transcript | ||
|
ENSMUST00000147310 (Sqrdl-007)
|
122784944-122788018 | processed_transcript | ||
|
ENSMUST00000147475 (Sqrdl-004)
|
122765391-122785095 | protein_coding | ||
|
ENSMUST00000176343 (Sqrdl-009)
|
122799762-122809559 | protein_coding | ||
|
ENSMUST00000176999 (Sqrdl-006)
|
122771718-122800762 | retained_intron | ||
|
ENSMUSG00000005804 (Bloc1s6) biogenesis of lysosomal organelles complex-1, subunit 6, pallidin |
ENSMUST00000005954 (Bloc1s6-001)
|
122738503-122749475 | protein_coding | |
|
ENSMUST00000127595 (Bloc1s6-003)
|
122738513-122745980 | processed_transcript | ||
|
ENSMUST00000129690 (Bloc1s6-006)
|
122738559-122747006 | processed_transcript | ||
|
ENSMUST00000145037 (Bloc1s6-005)
|
122738530-122746046 | processed_transcript | ||
|
ENSMUST00000146449 (Bloc1s6-004)
|
122738527-122739159 | processed_transcript | ||
|
ENSMUST00000148460 (Bloc1s6-002)
|
122738519-122748099 | processed_transcript | ||
Expression Patterns
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