C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence BC003331
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006010 BC003331 10090 - 1:150361305-150393080 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006167 BC003331-002 150362521-150392719 protein_coding
  ENSMUST00000094477 BC003331-004 150362534-150392743 nonsense_mediated_decay
  ENSMUST00000097546 BC003331-201 150361313-150393055 protein_coding
  ENSMUST00000097547 BC003331-003 150361313-150392762 protein_coding
  ENSMUST00000111913 BC003331-001 150361305-150393080 protein_coding
  ENSMUST00000132809 BC003331-008 150374804-150382474 retained_intron
  ENSMUST00000140112 BC003331-007 150388011-150392747 retained_intron
  ENSMUST00000148389 BC003331-005 150375532-150392937 processed_transcript
  ENSMUST00000150615 BC003331-006 150384282-150392748 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000097547ENSMUST00000111913
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000097547 N/A 7.186±0.00 N/A 5.983±0.00 N/A N/A 5.035±0.00 N/A N/A 10.134±0.00
ENSMUST00000111913 7.906±0.03 6.728±0.02 5.164±0.00 N/A 4.794±0.38 5.201±0.38 6.301±1.29 7.167±0.50 11.652±0.00 10.020±0.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042671 C2H1orf27 chromosome 1 open reading frame 27 protein_coding Danio_rerio
ENSG00000157181 C1orf27 chromosome 1 open reading frame 27 protein_coding Homo_sapiens

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