C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 1 open reading frame 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157181 C1orf27 9606 + 1:186375758-186421378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287859 C1orf27-001 186375869-186421378 protein_coding
  ENST00000367470 C1orf27-201 186375758-186421367 protein_coding
  ENST00000419367 C1orf27-004 186375823-186419551 protein_coding
  ENST00000432021 C1orf27-005 186379786-186419076 protein_coding
  ENST00000461662 C1orf27-002 186417377-186419233 processed_transcript
  ENST00000478571 C1orf27-003 186398420-186411893 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287859ENST00000367470ENST00000419367ENST00000432021
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287859 1.503±0.00 1.500±0.00 1.506±0.00 1.994±0.00 2.759±0.09 2.194±0.69 1.510±0.63 3.340±1.17 2.948±1.20 2.182±0.13 0.811±0.40 3.728±0.90 2.295±0.11 2.691±0.00
ENST00000367470 N/A N/A N/A N/A 0.666±0.00 N/A N/A N/A 0.501±0.00 0.870±0.03 N/A 1.329±0.00 1.730±0.00 N/A
ENST00000419367 N/A N/A 1.064±0.00 1.983±0.00 1.420±0.00 2.998±0.00 0.366±0.00 2.981±0.00 1.112±0.00 3.921±0.00 N/A 3.159±0.00 N/A N/A
ENST00000432021 1.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BN CIL_0001BN_0002 CGP 1:186311652-186421378

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042671 C2H1orf27 chromosome 1 open reading frame 27 protein_coding Danio_rerio
ENSMUSG00000006010 BC003331 cDNA sequence BC003331 protein_coding Mus_musculus

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