C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium binding and coiled-coil domain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006056 Calcoco2 10090 - 11:96099326-96111964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068686 Calcoco2-001 96099326-96111964 protein_coding
  ENSMUST00000097162 Calcoco2-201 96099914-96111962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungOvaryPlacentaTestisENSMUST00000068686ENSMUST00000097162
Transcript ID Bladder Brain Colon Lung Ovary Placenta Testis
ENSMUST00000068686 N/A 0.009±0.00 0.132±0.06 0.130±0.06 0.255±0.11 0.788±0.57 0.100±0.06
ENSMUST00000097162 0.027±0.00 0.240±0.00 0.110±0.01 N/A 0.755±0.47 1.215±1.41 0.151±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0002 VISTA 11:95992065-96592579

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0016020 IEA membrane
GO:0034341 IEA response to interferon-gamma
GO:0042803 IEA protein homodimerization activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052515 calcoco2 calcium binding and coiled-coil domain 2 protein_coding Danio_rerio
ENSG00000136436 CALCOCO2 calcium binding and coiled-coil domain 2 protein_coding Homo_sapiens

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