C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006390 Elovl1 10090 + 4:118428093-118432953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006557 Elovl1-001 118428093-118432953 protein_coding
  ENSMUST00000067896 Elovl1-003 118429701-118432272 protein_coding
  ENSMUST00000102673 Elovl1-002 118428125-118432613 protein_coding
  ENSMUST00000129419 Elovl1-005 118428174-118431949 processed_transcript
  ENSMUST00000135162 Elovl1-004 118428130-118428830 processed_transcript
  ENSMUST00000143140 Elovl1-006 118428208-118431074 processed_transcript
  ENSMUST00000167636 Elovl1-201 118428119-118432613 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000006557ENSMUST00000067896ENSMUST00000102673ENSMUST00000167636
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000006557 12.325±5.40 40.381±12.27 N/A N/A 17.267±5.88 12.307±1.72 3.786±0.90 15.701±3.09 7.227±1.57 N/A 0.577±0.18 15.092±1.40 9.257±0.00
ENSMUST00000067896 N/A N/A 16.746±0.00 N/A 68.620±0.00 N/A N/A N/A N/A N/A N/A 19.765±2.26 N/A
ENSMUST00000102673 14.468±0.21 13.729±0.00 28.905±1.27 4.375±0.00 22.915±2.82 35.942±8.36 3.500±0.23 29.115±4.04 13.999±6.70 166.462±53.44 1.757±0.83 30.329±11.15 30.203±10.49
ENSMUST00000167636 43.533±2.85 56.212±5.47 41.846±1.61 7.308±4.33 41.480±9.58 60.270±3.71 13.424±0.73 73.733±7.99 54.480±24.01 235.662±31.65 2.403±0.52 49.574±21.31 58.395±20.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0009922 IEA fatty acid elongase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016740 IEA transferase activity
GO:0019367 ISS fatty acid elongation, saturated fatty acid
GO:0030148 IMP sphingolipid biosynthetic process
GO:0034625 ISS fatty acid elongation, monounsaturated fatty acid
GO:0042761 ISS very long-chain fatty acid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002412 elovl1a elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1a protein_coding Danio_rerio
ENSDARG00000058356 elovl1b elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1b protein_coding Danio_rerio
ENSG00000066322 ELOVL1 ELOVL fatty acid elongase 1 protein_coding Homo_sapiens

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