C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ELOVL fatty acid elongase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000066322 ELOVL1 9606 - 1:43363397-43368074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372458 ELOVL1-001 43363397-43368018 protein_coding
  ENST00000413844 ELOVL1-201 43363398-43368074 protein_coding
  ENST00000464204 ELOVL1-005 43363756-43368007 processed_transcript
  ENST00000465321 ELOVL1-013 43364544-43368003 processed_transcript
  ENST00000468865 ELOVL1-004 43363728-43365268 processed_transcript
  ENST00000470769 ELOVL1-010 43363875-43366587 processed_transcript
  ENST00000470968 ELOVL1-006 43363771-43368025 processed_transcript
  ENST00000478481 ELOVL1-002 43364347-43365214 processed_transcript
  ENST00000479439 ELOVL1-014 43364542-43366329 processed_transcript
  ENST00000479686 ELOVL1-009 43364560-43367616 processed_transcript
  ENST00000482302 ELOVL1-011 43364015-43367416 processed_transcript
  ENST00000487209 ELOVL1-007 43363836-43367999 processed_transcript
  ENST00000496932 ELOVL1-003 43364576-43367965 processed_transcript
  ENST00000497050 ELOVL1-008 43364050-43367738 processed_transcript
  ENST00000497569 ELOVL1-012 43363994-43367104 processed_transcript
  ENST00000621943 ELOVL1-202 43363398-43367738 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372458ENST00000464204ENST00000468865ENST00000470769ENST00000470968ENST00000482302ENST00000487209ENST00000497050ENST00000497569
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372458 32.932±0.00 26.687±0.00 0.887±0.00 26.225±22.02 21.778±17.97 18.254±0.00 6.263±5.21 29.273±27.42 9.275±7.92 34.081±0.00 2.092±1.23 19.396±12.93 55.655±27.38 11.395±9.85
ENST00000464204 11.864±0.00 N/A N/A N/A N/A N/A 2.944±0.00 N/A N/A N/A N/A 1.783±0.00 N/A N/A
ENST00000468865 N/A 8.507±0.00 1.080±0.00 N/A N/A N/A N/A N/A N/A N/A 3.987±0.00 N/A N/A N/A
ENST00000470769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.510±0.00 N/A N/A
ENST00000470968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.390±0.00 34.938±0.00 7.255±0.00
ENST00000482302 N/A N/A N/A N/A 1.253±0.00 N/A 0.447±0.00 N/A N/A N/A N/A N/A N/A 1.349±0.00
ENST00000487209 19.010±0.00 12.359±0.00 N/A 48.679±0.00 28.681±0.00 11.922±0.00 N/A N/A N/A N/A N/A N/A N/A 8.877±0.00
ENST00000497050 N/A N/A 1.601±0.00 7.097±0.00 N/A 8.647±0.00 N/A N/A 3.437±0.00 5.595±0.00 N/A 3.353±0.00 N/A N/A
ENST00000497569 N/A N/A N/A N/A N/A N/A N/A 6.140±0.00 1.682±0.00 N/A 2.135±1.88 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B3 CIL_0005B3_0002 CGP 1:43358955-43368074

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0009922 IDA fatty acid elongase activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019367 IDA fatty acid elongation, saturated fatty acid
GO:0019432 TAS triglyceride biosynthetic process
GO:0030148 IMP sphingolipid biosynthetic process
GO:0030176 NAS integral component of endoplasmic reticulum membrane
GO:0034625 IDA fatty acid elongation, monounsaturated fatty acid
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0042761 IDA very long-chain fatty acid biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002412 elovl1a elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1a protein_coding Danio_rerio
ENSDARG00000058356 elovl1b elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1b protein_coding Danio_rerio
ENSMUSG00000006390 Elovl1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 protein_coding Mus_musculus

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