C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fanconi anemia, complementation group E
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007570 Fance 10090 + 17:28313530-28326568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088007 Fance-005 28313644-28326253 protein_coding
  ENSMUST00000114801 Fance-004 28313566-28326566 protein_coding
  ENSMUST00000114803 Fance-001 28313530-28326567 protein_coding
  ENSMUST00000114804 Fance-002 28313572-28326568 protein_coding
  ENSMUST00000123248 Fance-006 28317561-28326284 protein_coding
  ENSMUST00000124870 Fance-003 28313547-28326567 retained_intron
  ENSMUST00000128079 Fance-010 28316154-28317139 retained_intron
  ENSMUST00000133527 Fance-007 28316117-28320833 protein_coding
  ENSMUST00000140404 Fance-009 28317506-28318935 processed_transcript
  ENSMUST00000141648 Fance-014 28317860-28320817 retained_intron
  ENSMUST00000146104 Fance-012 28318346-28326499 protein_coding
  ENSMUST00000151312 Fance-013 28317050-28318269 retained_intron
  ENSMUST00000156505 Fance-008 28318117-28326449 protein_coding
  ENSMUST00000156569 Fance-011 28318455-28326567 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088007ENSMUST00000114801ENSMUST00000114803ENSMUST00000114804ENSMUST00000124870ENSMUST00000151312ENSMUST00000156505ENSMUST00000156569
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088007 1.010±0.00 N/A N/A 3.041±0.00 N/A N/A 0.495±0.06 1.142±0.27 N/A N/A N/A 5.295±1.88 3.327±1.71 0.387±0.00
ENSMUST00000114801 0.851±0.00 N/A N/A 2.189±1.86 N/A N/A 0.728±0.00 0.858±0.00 0.457±0.00 N/A 2.150±0.38 4.086±1.11 2.293±1.73 1.011±0.70
ENSMUST00000114803 2.315±0.89 2.321±0.62 2.830±0.91 1.175±0.07 2.056±1.00 1.791±0.65 0.722±0.03 1.238±0.38 1.332±0.73 2.222±0.46 1.340±0.40 2.949±0.94 1.881±0.51 0.455±0.04
ENSMUST00000114804 N/A 2.041±0.07 1.311±0.00 1.442±0.50 1.097±0.41 1.073±0.00 0.403±0.00 N/A 0.558±0.29 1.266±0.34 0.967±0.00 5.315±0.00 2.164±1.51 0.317±0.00
ENSMUST00000124870 1.017±0.32 1.645±0.28 1.122±0.00 0.830±0.00 1.455±0.08 1.061±0.13 0.407±0.00 0.639±0.06 0.518±0.21 0.980±0.11 0.669±0.20 1.627±0.43 1.066±0.74 0.240±0.03
ENSMUST00000151312 N/A N/A N/A N/A N/A N/A 0.744±0.00 1.003±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000156505 N/A N/A N/A N/A N/A N/A 1.554±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.873±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002EQ CIL_0002EQ_0002 CGP 17:28232754-28326568
CIL_0002L9 CIL_0002L9_0003 CGP 17:28313530-28331032

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0043240 IEA Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068870 fance Fanconi anemia, complementation group E protein_coding Danio_rerio
ENSG00000112039 FANCE Fanconi anemia, complementation group E protein_coding Homo_sapiens

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