C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002L9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068870-ENSDARG00000042905 CGP 7955 8:24584426-24595928
GeneTranscriptPositionBiotype
ENSDARG00000042905 (rpl10a)
ribosomal protein L10a 		ENSDART00000062983 (rpl10a-001) 24591065-24595928 protein_coding
ENSDART00000136547 (rpl10a-002) 24591099-24595919 processed_transcript
ENSDART00000138427 (rpl10a-004) 24591066-24593753 nonsense_mediated_decay
ENSDART00000141110 (rpl10a-003) 24591066-24593753 retained_intron
ENSDARG00000068870 (fance)
Fanconi anemia, complementation group E 		ENSDART00000099751 (fance-001) 24584426-24590313 protein_coding
CIL_0002L9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112039-ENSG00000198755 CGP 9606 6:35452361-35470785
GeneTranscriptPositionBiotype
ENSG00000112039 (FANCE)
Fanconi anemia, complementation group E 		ENST00000229769 (FANCE-001) 35452361-35467103 protein_coding
ENSG00000198755 (RPL10A)
ribosomal protein L10a 		ENST00000322203 (RPL10A-001) 35468408-35470785 protein_coding
ENST00000464112 (RPL10A-002) 35468420-35470785 processed_transcript
ENST00000467020 (RPL10A-005) 35468408-35470785 processed_transcript
ENST00000478340 (RPL10A-004) 35468420-35470785 processed_transcript
ENST00000490335 (RPL10A-003) 35468420-35470640 processed_transcript
ENSG00000276712 (MIR7111)
microRNA 7111 		ENST00000619751 (MIR7111-201) 35470508-35470579 miRNA
CIL_0002L9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007570-ENSMUSG00000037805 CGP 10090 17:28313530-28331032
GeneTranscriptPositionBiotype
ENSMUSG00000007570 (Fance)
Fanconi anemia, complementation group E 		ENSMUST00000088007 (Fance-005) 28313644-28326253 protein_coding
ENSMUST00000114801 (Fance-004) 28313566-28326566 protein_coding
ENSMUST00000114803 (Fance-001) 28313530-28326567 protein_coding
ENSMUST00000114804 (Fance-002) 28313572-28326568 protein_coding
ENSMUST00000123248 (Fance-006) 28317561-28326284 protein_coding
ENSMUST00000124870 (Fance-003) 28313547-28326567 retained_intron
ENSMUST00000128079 (Fance-010) 28316154-28317139 retained_intron
ENSMUST00000133527 (Fance-007) 28316117-28320833 protein_coding
ENSMUST00000140404 (Fance-009) 28317506-28318935 processed_transcript
ENSMUST00000141648 (Fance-014) 28317860-28320817 retained_intron
ENSMUST00000146104 (Fance-012) 28318346-28326499 protein_coding
ENSMUST00000151312 (Fance-013) 28317050-28318269 retained_intron
ENSMUST00000156505 (Fance-008) 28318117-28326449 protein_coding
ENSMUST00000156569 (Fance-011) 28318455-28326567 processed_transcript
ENSMUSG00000037805 (Rpl10a)
ribosomal protein L10A 		ENSMUST00000042334 (Rpl10a-001) 28328471-28331032 protein_coding
ENSMUST00000128758 (Rpl10a-006) 28328583-28329638 retained_intron
ENSMUST00000129935 (Rpl10a-002) 28328584-28331032 nonsense_mediated_decay
ENSMUST00000141049 (Rpl10a-007) 28329278-28331027 retained_intron
ENSMUST00000143443 (Rpl10a-004) 28328647-28329522 retained_intron
ENSMUST00000150103 (Rpl10a-005) 28328811-28330697 retained_intron
ENSMUST00000152665 (Rpl10a-003) 28328610-28329395 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002L9_0001ENSDARG00000042905ENSDART00000062983ENSDART00000136547ENSDART00000138427ENSDART00000141110ENSDARG00000068870ENSDART00000099751CIL_0002L9_0002ENSG00000112039ENST00000229769ENSG00000198755ENST00000322203ENST00000464112ENST00000467020ENST00000478340ENST00000490335ENSG00000276712ENST00000619751CIL_0002L9_0003ENSMUSG00000007570ENSMUST00000088007ENSMUST00000114801ENSMUST00000114803ENSMUST00000114804ENSMUST00000123248ENSMUST00000124870ENSMUST00000128079ENSMUST00000133527ENSMUST00000140404ENSMUST00000141648ENSMUST00000146104ENSMUST00000151312ENSMUST00000156505ENSMUST00000156569ENSMUSG00000037805ENSMUST00000042334ENSMUST00000128758ENSMUST00000129935ENSMUST00000141049ENSMUST00000143443ENSMUST00000150103ENSMUST00000152665
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002L9_0001ENSDARG00000042905ENSDART00000062983ENSDART00000136547ENSDART00000138427ENSDARG00000068870ENSDART00000099751CIL_0002L9_0002ENSG00000112039ENST00000229769ENSG00000198755ENST00000322203ENST00000490335ENSG00000276712ENST00000619751CIL_0002L9_0003ENSMUSG00000007570ENSMUST00000088007ENSMUST00000114801ENSMUST00000114803ENSMUST00000114804ENSMUST00000124870ENSMUST00000151312ENSMUST00000156505ENSMUST00000156569ENSMUSG00000037805ENSMUST00000042334ENSMUST00000128758ENSMUST00000141049ENSMUST00000152665
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042905 ENSDART00000062983 N/A N/A N/A 135.015±137.61 N/A N/A 928.311±657.97 516.154±724.85 657.300±0.00 N/A 758.389±0.00 N/A N/A N/A
ENSDART00000136547 N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000138427 N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000068870 ENSDART00000099751 N/A N/A N/A 2.728±1.89 N/A N/A 2.893±2.14 1.060±1.05 0.086±0.00 N/A 1.191±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112039 ENST00000229769 2.673±0.00 2.517±0.00 0.053±0.00 0.565±0.23 2.433±0.00 1.065±1.00 1.148±0.00 1.280±0.00 0.769±0.08 2.199±0.74 27.511±0.00 3.115±1.17 5.464±2.58 4.803±2.49
ENSG00000198755 ENST00000322203 259.598±0.00 352.543±0.00 28.338±0.00 80.752±23.04 148.468±34.12 292.582±166.78 64.426±37.40 189.601±104.09 144.916±3.63 236.184±164.42 180.425±100.05 769.397±681.75 734.610±204.95 140.573±43.34
ENST00000464112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490335 83.023±0.00 112.644±0.00 N/A 42.499±0.00 75.090±0.00 147.924±0.00 24.381±0.00 N/A 47.647±0.00 172.995±0.00 110.525±0.00 698.353±0.00 487.805±0.00 132.150±49.05
ENSG00000276712 ENST00000619751 N/A N/A N/A 1.122±0.00 N/A N/A N/A 1.063±0.00 N/A 2.690±0.00 N/A 146.993±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007570 ENSMUST00000088007 1.010±0.00 N/A N/A 3.041±0.00 N/A N/A 0.495±0.06 1.142±0.27 N/A N/A N/A 5.295±1.88 3.327±1.71 0.387±0.00
ENSMUST00000114801 0.851±0.00 N/A N/A 2.189±1.86 N/A N/A 0.728±0.00 0.858±0.00 0.457±0.00 N/A 2.150±0.38 4.086±1.11 2.293±1.73 1.011±0.70
ENSMUST00000114803 2.315±0.89 2.321±0.62 2.830±0.91 1.175±0.07 2.056±1.00 1.791±0.65 0.722±0.03 1.238±0.38 1.332±0.73 2.222±0.46 1.340±0.40 2.949±0.94 1.881±0.51 0.455±0.04
ENSMUST00000114804 N/A 2.041±0.07 1.311±0.00 1.442±0.50 1.097±0.41 1.073±0.00 0.403±0.00 N/A 0.558±0.29 1.266±0.34 0.967±0.00 5.315±0.00 2.164±1.51 0.317±0.00
ENSMUST00000123248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124870 1.017±0.32 1.645±0.28 1.122±0.00 0.830±0.00 1.455±0.08 1.061±0.13 0.407±0.00 0.639±0.06 0.518±0.21 0.980±0.11 0.669±0.20 1.627±0.43 1.066±0.74 0.240±0.03
ENSMUST00000128079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151312 N/A N/A N/A N/A N/A N/A 0.744±0.00 1.003±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000156505 N/A N/A N/A N/A N/A N/A 1.554±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.873±0.00 N/A
ENSMUSG00000037805 ENSMUST00000042334 369.048±154.74 452.013±80.64 808.825±24.54 329.483±191.89 429.714±160.75 680.134±159.55 155.578±54.77 484.023±65.03 609.796±412.72 349.341±53.86 144.458±10.93 850.158±514.25 455.056±319.24 97.455±44.56
ENSMUST00000128758 112.717±4.93 56.665±6.47 N/A N/A 78.595±12.73 80.608±11.73 N/A N/A 65.273±67.55 N/A N/A 119.012±7.54 N/A 19.427±1.44
ENSMUST00000129935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141049 N/A N/A N/A N/A 11.830±0.00 N/A N/A N/A N/A N/A N/A 11.952±0.49 N/A N/A
ENSMUST00000143443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152665 N/A 226.509±89.28 N/A 184.717±0.00 N/A N/A N/A N/A N/A N/A N/A 1034.740±0.00 446.661±220.50 N/A

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