C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2310007L24 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009210 2310007L24Rik 10090 + 11:106365472-106377558 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009354 2310007L24Rik-001 106365472-106377114 protein_coding
  ENSMUST00000106816 2310007L24Rik-002 106374826-106377096 protein_coding
  ENSMUST00000185986 2310007L24Rik-006 106374845-106377348 protein_coding
  ENSMUST00000188561 2310007L24Rik-007 106374845-106377157 protein_coding
  ENSMUST00000190268 2310007L24Rik-005 106374845-106377558 protein_coding
  ENSMUST00000190795 2310007L24Rik-004 106374845-106377242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009354ENSMUST00000106816ENSMUST00000185986ENSMUST00000188561ENSMUST00000190268ENSMUST00000190795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009354 0.039±0.01 N/A 0.114±0.00 N/A 0.252±0.03 N/A 0.985±0.37 0.034±0.00 N/A N/A 1.906±0.00 N/A 0.005±0.00 0.157±0.01
ENSMUST00000106816 0.112±0.00 N/A 0.077±0.04 0.147±0.00 0.751±0.32 0.454±0.16 1.822±1.00 0.077±0.03 0.015±0.00 9.044±0.86 N/A 16.396±6.79 0.028±0.00 0.170±0.10
ENSMUST00000185986 N/A N/A N/A N/A 0.110±0.01 N/A N/A 0.103±0.00 0.024±0.00 N/A 0.964±0.00 2.615±0.00 N/A N/A
ENSMUST00000188561 N/A 0.054±0.00 N/A N/A 0.196±0.00 N/A N/A 0.087±0.00 0.039±0.02 N/A N/A N/A 0.218±0.00 N/A
ENSMUST00000190268 0.087±0.03 0.057±0.00 N/A 0.131±0.00 N/A 0.078±0.03 N/A 0.020±0.00 0.011±0.00 N/A N/A 0.630±0.00 0.105±0.10 N/A
ENSMUST00000190795 0.159±0.00 0.060±0.02 N/A 0.032±0.00 0.261±0.05 0.227±0.10 N/A 0.042±0.00 0.076±0.00 1.396±0.00 N/A 1.730±0.97 0.202±0.00 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0002 VISTA 11:105834084-106435839
CIL_0002P3 CIL_0002P3_0002 CGP 11:106318592-106377558
CIL_0002P5 CIL_0002P5_0002 CGP 11:106365472-106388075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000224383 PRR29 proline rich 29 protein_coding Homo_sapiens

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