C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium voltage-gated channel, Shal-related family, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000009731 Kcnd1 10090 + X:7822289-7838280 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009875 Kcnd1-001 7822289-7838280 protein_coding
  ENSMUST00000125440 Kcnd1-002 7822307-7823267 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009875ENSMUST00000125440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009875 0.670±0.35 0.496±0.09 0.903±0.09 0.166±0.00 0.681±0.29 0.791±0.18 0.133±0.09 0.101±0.10 0.163±0.15 0.210±0.16 0.058±0.03 1.081±0.49 0.557±0.26 0.071±0.00
ENSMUST00000125440 N/A 0.545±0.02 N/A N/A N/A 0.920±0.00 N/A N/A N/A N/A N/A N/A 0.450±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U6 CIL_0003U6_0002 CGP X:7789765-7838280

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042995 IEA cell projection
GO:0043025 IEA neuronal cell body
GO:0046872 IEA metal ion binding
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074746 kcnd1 potassium voltage-gated channel, Shal-related subfamily, member 1 protein_coding Danio_rerio
ENSG00000102057 KCND1 potassium voltage-gated channel, Shal-related subfamily, member 1 protein_coding Homo_sapiens

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