C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tight junction associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000012296 Tjap1 10090 - 17:46257851-46283026 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000012440 Tjap1-201 46257851-46283026 protein_coding
  ENSMUST00000164342 Tjap1-202 46257851-46283026 protein_coding
  ENSMUST00000180283 Tjap1-203 46257851-46283026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000012440ENSMUST00000164342ENSMUST00000180283
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000012440 2.848±0.21 N/A 3.457±0.18 2.582±0.52 2.571±1.25 2.188±0.00 2.105±0.08 1.477±0.40 1.454±0.59 2.500±0.28 1.652±0.05 2.972±0.55 4.082±2.37 1.323±0.11
ENSMUST00000164342 3.448±0.24 N/A 4.370±0.00 3.137±0.36 0.679±0.00 2.735±0.08 0.932±0.00 1.500±0.15 1.004±0.63 1.859±0.00 1.405±0.37 4.546±1.24 3.250±0.58 2.389±0.21
ENSMUST00000180283 5.414±1.35 3.754±0.00 4.273±2.34 6.765±3.11 6.271±2.82 5.535±3.25 1.787±0.14 1.910±0.52 1.599±0.66 5.430±1.95 1.759±0.00 11.538±8.91 7.039±4.70 5.088±1.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_0006UN CIL_0006UN_0002 CGP 17:46254165-46283026
CIL_0006UQ CIL_0006UQ_0002 CGP 17:46257851-46303271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005768 IDA endosome
GO:0005794 IEA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0005886 IDA plasma membrane
GO:0005923 ISA tight junction
GO:0007030 IMP Golgi organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010681 tjap1 tight junction associated protein 1 (peripheral) protein_coding Danio_rerio
ENSG00000137221 TJAP1 tight junction associated protein 1 (peripheral) protein_coding Homo_sapiens

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