C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tight junction associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000012440 Tjap1-201 ENSMUSG00000012296 10090 - 17:46257851-46283026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000012440
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000012440 2.848±0.21 3.457±0.18 2.582±0.52 2.571±1.25 2.188±0.00 2.105±0.08 1.477±0.40 1.454±0.59 2.500±0.28 1.652±0.05 2.972±0.55 4.082±2.37 1.323±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190
CIL_0006UN CIL_0006UN_0002 CGP 17:46254165-46283026
CIL_0006UQ CIL_0006UQ_0002 CGP 17:46257851-46303271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005768 IDA endosome
GO:0005802 IDA trans-Golgi network
GO:0005886 IDA plasma membrane
GO:0005923 ISA tight junction
GO:0007030 IMP Golgi organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259751 TJAP1-006 protein_coding Homo_sapiens 0 1426
ENST00000372444 TJAP1-201 protein_coding Homo_sapiens 0 1506
ENST00000372445 TJAP1-202 protein_coding Homo_sapiens 0 1048
ENST00000372449 TJAP1-009 protein_coding Homo_sapiens 0 1048
ENST00000372452 TJAP1-008 protein_coding Homo_sapiens 0 1611
ENST00000372454 TJAP1-007 protein_coding Homo_sapiens 0 549
ENST00000436109 TJAP1-203 protein_coding Homo_sapiens 0 1504
ENST00000438588 TJAP1-204 protein_coding Homo_sapiens 0 1048
ENST00000442878 TJAP1-010 protein_coding Homo_sapiens 0 292
ENST00000454762 TJAP1-005 protein_coding Homo_sapiens 0 760
ENST00000459851 TJAP1-004 processed_transcript Homo_sapiens 0 577
ENST00000478173 TJAP1-002 processed_transcript Homo_sapiens 0 579
ENST00000483640 TJAP1-001 processed_transcript Homo_sapiens 0 1050
ENST00000490050 TJAP1-003 processed_transcript Homo_sapiens 0 499
ENST00000612912 TJAP1-205 protein_coding Homo_sapiens 0 604

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