C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bicaudal C homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014329 Bicc1 10090 - 10:70922832-71159700 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000014473 Bicc1-003 70925102-71159690 protein_coding
  ENSMUST00000131445 Bicc1-002 70925102-71146860 protein_coding
  ENSMUST00000143791 Bicc1-001 70922832-71159700 protein_coding
  ENSMUST00000144740 Bicc1-004 70934502-70948489 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014473ENSMUST00000131445ENSMUST00000143791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014473 6.775±3.75 2.905±1.25 3.859±0.85 0.640±0.18 3.477±1.99 1.589±0.24 2.806±0.74 9.966±3.49 0.495±0.18 5.853±2.57 N/A 8.185±4.10 1.136±0.21 0.235±0.00
ENSMUST00000131445 1.337±0.00 N/A 7.709±0.00 N/A 3.291±0.59 2.753±0.86 2.139±0.22 8.887±5.68 0.485±0.36 3.966±0.00 N/A 6.981±0.00 0.803±0.18 0.570±0.06
ENSMUST00000143791 3.910±1.86 1.815±0.45 9.445±4.47 0.668±0.17 2.937±1.17 2.788±0.71 2.670±0.88 12.891±4.48 0.826±0.58 4.604±1.58 0.609±0.25 6.209±3.01 1.745±1.45 0.755±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090R CIL_00090R_0002 VISTA 10:70433384-71034387

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 ISA RNA binding
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0044822 IEA poly(A) RNA binding
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061682 bicc1a bicaudal C homolog 1a (Drosophila) protein_coding Danio_rerio
ENSDARG00000070497 bicc1b bicaudal C homolog 1b (Drosophila) protein_coding Danio_rerio
ENSG00000122870 BICC1 BicC family RNA binding protein 1 protein_coding Homo_sapiens

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