C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EFR3 homolog A (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015002 Efr3a 10090 + 15:65787034-65873816 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015146 Efr3a-001 65787040-65873816 protein_coding
  ENSMUST00000096411 Efr3a-005 65787041-65790834 processed_transcript
  ENSMUST00000172756 Efr3a-003 65787046-65825467 protein_coding
  ENSMUST00000173008 Efr3a-008 65787840-65790840 processed_transcript
  ENSMUST00000173858 Efr3a-002 65787041-65869251 protein_coding
  ENSMUST00000173936 Efr3a-011 65855502-65857736 retained_intron
  ENSMUST00000174135 Efr3a-006 65787034-65791351 processed_transcript
  ENSMUST00000174591 Efr3a-004 65787048-65822540 retained_intron
  ENSMUST00000174601 Efr3a-009 65787042-65829808 processed_transcript
  ENSMUST00000174615 Efr3a-010 65851164-65856832 retained_intron
  ENSMUST00000174749 Efr3a-012 65857508-65867189 retained_intron
  ENSMUST00000174856 Efr3a-007 65787048-65819860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015146ENSMUST00000173858ENSMUST00000174601ENSMUST00000174749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015146 22.888±0.54 15.967±1.91 19.434±1.06 5.866±1.02 22.597±2.40 12.774±2.49 13.568±0.50 16.958±0.56 8.904±2.78 17.958±2.79 5.562±0.79 18.597±5.89 9.046±3.40 19.743±8.92
ENSMUST00000173858 N/A N/A N/A 6.526±0.00 N/A N/A N/A N/A N/A N/A N/A 3.479±0.00 4.301±0.00 N/A
ENSMUST00000174601 38.813±2.17 85.335±25.77 N/A N/A 52.391±1.62 33.062±8.81 N/A 13.518±0.00 N/A 41.765±7.78 N/A 58.134±10.91 N/A 25.648±0.00
ENSMUST00000174749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.466±0.00 16.167±0.63 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C9 CIL_0000C9_0004 CGP 15:65787034-65912397

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IDA intracellular
GO:0005886 IDA plasma membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005163 efr3a EFR3 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSDARG00000087491 efr3a EFR3 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSG00000132294 EFR3A EFR3 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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