C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000C9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005163-ENSDARG00000001721 CGP 7955 2:42973773-43061471
GeneTranscriptPositionBiotype
ENSDARG00000001721 (oc90)
otoconin 90
ENSDART00000098303 (oc90-001) 43043670-43061471 protein_coding
ENSDART00000139945 (oc90-002) 43054384-43059231 protein_coding
ENSDART00000144317 (oc90-003) 43054487-43059737 protein_coding
ENSDARG00000005163 (efr3a)
EFR3 homolog A (S. cerevisiae)
ENSDART00000036979 (efr3a-201) 42973773-43027438 protein_coding
CIL_0000C9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087491-ENSDARG00000089064 CGP 7955 2:41686645-41787554
GeneTranscriptPositionBiotype
ENSDARG00000089064 (CR848728.2)
Uncharacterized protein
ENSDART00000127869 (CR848728.2-201) 41720884-41787554 protein_coding
CIL_0000C9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132294-ENSG00000253117 CGP 9606 8:131904088-132059380
GeneTranscriptPositionBiotype
ENSG00000132294 (EFR3A)
EFR3 homolog A (S. cerevisiae)
ENST00000254624 (EFR3A-001) 131904088-132013642 protein_coding
ENST00000519656 (EFR3A-002) 131939901-132013642 protein_coding
ENST00000519920 (EFR3A-007) 131984139-132000956 processed_transcript
ENST00000520362 (EFR3A-004) 131939881-131944805 protein_coding
ENST00000521940 (EFR3A-006) 132000755-132011146 processed_transcript
ENST00000522709 (EFR3A-003) 131904109-131953836 protein_coding
ENST00000523074 (EFR3A-005) 131996390-132011079 retained_intron
ENSG00000253117 (OC90)
otoconin 90
ENST00000254627 (OC90-001) 132024220-132059380 protein_coding
CIL_0000C9_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015002-ENSMUSG00000015001 CGP 10090 15:65787034-65912397
GeneTranscriptPositionBiotype
ENSMUSG00000015001 (Oc90)
otoconin 90
ENSMUST00000060522 (Oc90-001) 65876053-65912397 protein_coding
ENSMUST00000079776 (Oc90-002) 65876053-65912254 protein_coding
ENSMUST00000135442 (Oc90-004) 65876392-65892438 protein_coding
ENSMUST00000147776 (Oc90-005) 65876520-65889638 protein_coding
ENSMUST00000156996 (Oc90-003) 65876053-65901561 protein_coding
ENSMUSG00000015002 (Efr3a)
EFR3 homolog A (S. cerevisiae)
ENSMUST00000015146 (Efr3a-001) 65787040-65873816 protein_coding
ENSMUST00000096411 (Efr3a-005) 65787041-65790834 processed_transcript
ENSMUST00000172756 (Efr3a-003) 65787046-65825467 protein_coding
ENSMUST00000173008 (Efr3a-008) 65787840-65790840 processed_transcript
ENSMUST00000173858 (Efr3a-002) 65787041-65869251 protein_coding
ENSMUST00000173936 (Efr3a-011) 65855502-65857736 retained_intron
ENSMUST00000174135 (Efr3a-006) 65787034-65791351 processed_transcript
ENSMUST00000174591 (Efr3a-004) 65787048-65822540 retained_intron
ENSMUST00000174601 (Efr3a-009) 65787042-65829808 processed_transcript
ENSMUST00000174615 (Efr3a-010) 65851164-65856832 retained_intron
ENSMUST00000174749 (Efr3a-012) 65857508-65867189 retained_intron
ENSMUST00000174856 (Efr3a-007) 65787048-65819860 protein_coding
ENSMUSG00000092495 (Gm20405)
predicted gene 20405
ENSMUST00000174002 (Gm20405-001) 65857869-65858356 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C9_0001ENSDARG00000001721ENSDART00000098303ENSDART00000139945ENSDART00000144317ENSDARG00000005163ENSDART00000036979CIL_0000C9_0002ENSDARG00000089064ENSDART00000127869CIL_0000C9_0003ENSG00000132294ENST00000254624ENST00000519656ENST00000519920ENST00000520362ENST00000521940ENST00000522709ENST00000523074ENSG00000253117ENST00000254627CIL_0000C9_0004ENSMUSG00000015001ENSMUST00000060522ENSMUST00000079776ENSMUST00000135442ENSMUST00000147776ENSMUST00000156996ENSMUSG00000015002ENSMUST00000015146ENSMUST00000096411ENSMUST00000172756ENSMUST00000173008ENSMUST00000173858ENSMUST00000173936ENSMUST00000174135ENSMUST00000174591ENSMUST00000174601ENSMUST00000174615ENSMUST00000174749ENSMUST00000174856ENSMUSG00000092495ENSMUST00000174002
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C9_0001ENSDARG00000001721ENSDART00000098303ENSDART00000144317ENSDARG00000005163ENSDART00000036979CIL_0000C9_0002ENSDARG00000089064ENSDART00000127869CIL_0000C9_0003ENSG00000132294ENST00000254624ENST00000519656ENST00000522709ENSG00000253117ENST00000254627CIL_0000C9_0004ENSMUSG00000015001ENSMUST00000060522ENSMUST00000079776ENSMUST00000135442ENSMUST00000147776ENSMUST00000156996ENSMUSG00000015002ENSMUST00000015146ENSMUST00000173858ENSMUST00000174601ENSMUST00000174749ENSMUSG00000092495ENSMUST00000174002
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001721 ENSDART00000098303 N/A N/A N/A 0.077±0.02 N/A N/A 0.038±0.02 0.156±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000139945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144317 N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000005163 ENSDART00000036979 N/A N/A N/A 2.092±1.41 N/A N/A 0.299±0.10 0.145±0.17 0.639±0.00 N/A 0.404±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000089064 ENSDART00000127869 N/A N/A N/A 0.111±0.02 N/A N/A 0.017±0.00 0.195±0.09 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132294 ENST00000254624 6.713±0.00 5.357±0.00 N/A 9.512±6.42 9.631±1.43 7.218±4.25 3.534±1.86 9.681±0.00 4.860±0.00 5.521±1.35 3.295±0.00 9.499±5.09 6.374±2.27 14.665±4.17
ENST00000519656 N/A N/A 1.943±0.00 10.736±0.00 N/A 3.083±0.00 1.402±0.00 6.735±0.00 8.934±0.00 5.847±0.00 4.293±0.00 2.013±0.00 N/A N/A
ENST00000519920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.966±0.00 N/A N/A N/A
ENST00000523074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253117 ENST00000254627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015001 ENSMUST00000060522 N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 0.004±0.00 0.107±0.01
ENSMUST00000079776 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.06
ENSMUST00000135442 N/A N/A N/A 0.031±0.01 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A 0.161±0.00
ENSMUST00000147776 N/A N/A N/A N/A N/A N/A N/A 0.075±0.04 N/A N/A N/A 0.077±0.00 0.055±0.05 0.084±0.00
ENSMUST00000156996 N/A N/A 0.010±0.00 0.038±0.01 N/A N/A N/A 0.036±0.01 0.004±0.00 N/A N/A 0.055±0.00 0.061±0.00 0.095±0.08
ENSMUSG00000015002 ENSMUST00000015146 22.888±0.54 15.967±1.91 19.434±1.06 5.866±1.02 22.597±2.40 12.774±2.49 13.568±0.50 16.958±0.56 8.904±2.78 17.958±2.79 5.562±0.79 18.597±5.89 9.046±3.40 19.743±8.92
ENSMUST00000096411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173858 N/A N/A N/A 6.526±0.00 N/A N/A N/A N/A N/A N/A N/A 3.479±0.00 4.301±0.00 N/A
ENSMUST00000173936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174601 38.813±2.17 85.335±25.77 N/A N/A 52.391±1.62 33.062±8.81 N/A 13.518±0.00 N/A 41.765±7.78 N/A 58.134±10.91 N/A 25.648±0.00
ENSMUST00000174615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.466±0.00 16.167±0.63 N/A
ENSMUST00000174856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092495 ENSMUST00000174002 N/A N/A N/A 2.280±0.00 1.261±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.833±0.00

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