C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: choline dehydrogenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015970 Chdh 10090 + 14:30009023-30040466 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067620 Chdh-001 30009023-30040466 protein_coding
  ENSMUST00000118917 Chdh-002 30022633-30038247 protein_coding
  ENSMUST00000125796 Chdh-003 30009171-30027203 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067620ENSMUST00000118917
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067620 11.097±9.48 3.260±1.48 0.332±0.01 5.598±2.21 5.567±4.54 0.519±0.20 35.460±8.06 10.909±8.29 1.273±0.00 0.107±0.08 12.013±1.90 15.664±11.41 4.390±1.77
ENSMUST00000118917 6.982±0.86 2.313±0.58 N/A 8.227±3.51 11.894±3.36 N/A 22.235±2.40 11.252±2.35 N/A 0.065±0.00 14.820±3.83 14.276±0.00 2.156±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008812 IEA choline dehydrogenase activity
GO:0019285 IEA glycine betaine biosynthetic process from choline
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075162 chdh choline dehydrogenase protein_coding Danio_rerio
ENSG00000016391 CHDH choline dehydrogenase protein_coding Homo_sapiens

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