C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: choline dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067620 Chdh-001 ENSMUSG00000015970 10090 + 14:30009023-30040466 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067620
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067620 11.097±9.48 3.260±1.48 0.332±0.01 5.598±2.21 5.567±4.54 0.519±0.20 35.460±8.06 10.909±8.29 1.273±0.00 0.107±0.08 12.013±1.90 15.664±11.41 4.390±1.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0008812 IEA choline dehydrogenase activity
GO:0019285 IEA glycine betaine biosynthetic process from choline
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288139 CACNA1D-001 protein_coding Homo_sapiens 4.00001e-40 172
ENST00000315251 CHDH-001 protein_coding Homo_sapiens 0 1696
ENST00000481668 CHDH-003 protein_coding Homo_sapiens 0 316

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