C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ataxin 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016541 Atxn10 10090 + 15:85336381-85463836 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000163242 Atxn10-201 85336381-85463836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000163242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163242 26.660±10.17 46.002±3.83 21.626±13.29 58.471±18.46 22.849±3.47 7.411±0.45 13.358±1.93 16.336±2.09 9.295±3.12 32.718±1.25 8.119±0.70 26.028±10.28 171.830±37.28 27.322±9.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KW CIL_0008KW_0002 VISTA 15:85164142-85764949
CIL_00054E CIL_00054E_0002 CGP 15:85205949-85463836

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0007399 IEA nervous system development
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0030425 IEA dendrite
GO:0031175 IEA neuron projection development
GO:0042802 IEA identical protein binding
GO:0043025 IEA neuronal cell body
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008439 atxn10 ataxin 10 protein_coding Danio_rerio
ENSG00000130638 ATXN10 ataxin 10 protein_coding Homo_sapiens

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