C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gasdermin A2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017211 Gsdma2 10090 + 11:98646759-98657964 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017355 Gsdma2-002 98646763-98657953 protein_coding
  ENSMUST00000093938 Gsdma2-001 98646759-98657964 protein_coding
  ENSMUST00000127692 Gsdma2-003 98646763-98650123 processed_transcript
  ENSMUST00000129186 Gsdma2-007 98651521-98654944 processed_transcript
  ENSMUST00000131549 Gsdma2-004 98646769-98649084 processed_transcript
  ENSMUST00000136111 Gsdma2-006 98650659-98652060 processed_transcript
  ENSMUST00000138686 Gsdma2-005 98646775-98649695 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLungOvaryPlacentaTestisENSMUST00000017355ENSMUST00000093938ENSMUST00000127692ENSMUST00000129186ENSMUST00000136111ENSMUST00000138686
Transcript ID Adrenal Brain Breast Lung Ovary Placenta Testis
ENSMUST00000017355 0.126±0.03 0.018±0.01 0.024±0.00 N/A 0.130±0.00 0.008±0.00 0.166±0.07
ENSMUST00000093938 0.094±0.02 N/A N/A N/A N/A N/A N/A
ENSMUST00000127692 N/A N/A N/A 0.045±0.00 N/A 0.060±0.00 N/A
ENSMUST00000129186 N/A N/A N/A N/A N/A N/A 0.056±0.00
ENSMUST00000136111 N/A N/A N/A N/A N/A 0.140±0.00 0.126±0.00
ENSMUST00000138686 N/A N/A N/A N/A N/A N/A 0.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167914 GSDMA gasdermin A protein_coding Homo_sapiens

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