C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gasdermin A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017355 Gsdma2-002 ENSMUSG00000017211 10090 + 11:98646763-98657953 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastOvaryPlacentaTestisENSMUST00000017355
Transcript ID Adrenal Brain Breast Ovary Placenta Testis
ENSMUST00000017355 0.126±0.03 0.018±0.01 0.024±0.00 0.130±0.00 0.008±0.00 0.166±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301659 GSDMA-001 protein_coding Homo_sapiens 0 551
ENST00000577447 GSDMA-002 protein_coding Homo_sapiens 0 285

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