C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tensin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017607 Tns4 10090 - 11:99065678-99089306 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017751 Tns4-001 99065678-99089306 protein_coding
  ENSMUST00000107465 Tns4-004 99068175-99073864 processed_transcript
  ENSMUST00000123303 Tns4-002 99085471-99089285 retained_intron
  ENSMUST00000153351 Tns4-003 99070684-99075341 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017751ENSMUST00000107465ENSMUST00000123303ENSMUST00000153351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017751 1.626±1.12 0.079±0.04 9.366±0.38 0.042±0.01 1.758±0.44 37.170±12.41 0.058±0.03 0.121±0.02 0.042±0.03 0.818±0.50 0.035±0.02 1.863±0.98 10.922±13.63 0.167±0.07
ENSMUST00000107465 0.370±0.07 0.354±0.15 N/A N/A N/A N/A 0.180±0.05 0.512±0.07 0.294±0.07 0.811±0.02 0.098±0.02 1.657±0.00 24.852±20.95 0.795±0.07
ENSMUST00000123303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 2.538±0.00 N/A N/A
ENSMUST00000153351 0.303±0.00 0.217±0.03 N/A N/A N/A N/A N/A 0.205±0.00 0.203±0.03 N/A N/A N/A N/A 0.542±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005R3 CIL_0005R3_0002 CGP 11:99041244-99089306
CIL_0005QX CIL_0005QX_0002 CGP 11:99065678-99155077

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005925 IEA focal adhesion
GO:0006915 IEA apoptotic process
GO:0008104 IEA protein localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000131746 TNS4 tensin 4 protein_coding Homo_sapiens

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