C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005QX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131746-ENSG00000126353 CGP 9606 17:40475828-40565472
GeneTranscriptPositionBiotype
ENSG00000126353 (CCR7)
chemokine (C-C motif) receptor 7
ENST00000246657 (CCR7-001) 40553769-40565472 protein_coding
ENST00000578085 (CCR7-003) 40555092-40565459 protein_coding
ENST00000579344 (CCR7-002) 40554330-40561013 protein_coding
ENSG00000131746 (TNS4)
tensin 4
ENST00000254051 (TNS4-001) 40475828-40501597 protein_coding
ENST00000394072 (TNS4-002) 40475828-40480875 retained_intron
ENST00000497303 (TNS4-003) 40478232-40480012 retained_intron
ENST00000582747 (TNS4-004) 40477804-40478648 protein_coding
ENSG00000266088 (RP5-1028K7.2)
ENST00000577557 (RP5-1028K7.2-002) 40525561-40527002 lincRNA
ENST00000578280 (RP5-1028K7.2-001) 40517026-40527002 lincRNA
CIL_0005QX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017607-ENSMUSG00000037944 CGP 10090 11:99065678-99155077
GeneTranscriptPositionBiotype
ENSMUSG00000017607 (Tns4)
tensin 4
ENSMUST00000017751 (Tns4-001) 99065678-99089306 protein_coding
ENSMUST00000107465 (Tns4-004) 99068175-99073864 processed_transcript
ENSMUST00000123303 (Tns4-002) 99085471-99089285 retained_intron
ENSMUST00000153351 (Tns4-003) 99070684-99075341 retained_intron
ENSMUSG00000037944 (Ccr7)
chemokine (C-C motif) receptor 7
ENSMUST00000103134 (Ccr7-001) 99144196-99155077 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QX_0001ENSG00000126353ENST00000246657ENST00000578085ENST00000579344ENSG00000131746ENST00000254051ENST00000394072ENST00000497303ENST00000582747ENSG00000266088ENST00000577557ENST00000578280CIL_0005QX_0002ENSMUSG00000017607ENSMUST00000017751ENSMUST00000107465ENSMUST00000123303ENSMUST00000153351ENSMUSG00000037944ENSMUST00000103134
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QX_0001ENSG00000126353ENST00000246657ENST00000578085ENST00000579344ENSG00000131746ENST00000254051ENST00000394072ENST00000582747ENSG00000266088ENST00000577557ENST00000578280CIL_0005QX_0002ENSMUSG00000017607ENSMUST00000017751ENSMUST00000107465ENSMUST00000123303ENSMUST00000153351ENSMUSG00000037944ENSMUST00000103134
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126353 ENST00000246657 N/A N/A N/A 0.068±0.00 N/A N/A 0.027±0.00 N/A N/A 1.372±0.00 0.008±0.00 N/A 0.581±0.18 0.116±0.00
ENST00000578085 N/A N/A N/A N/A 0.693±0.00 0.621±0.00 N/A 0.632±0.00 N/A N/A N/A 0.341±0.00 N/A N/A
ENST00000579344 N/A N/A N/A N/A N/A 0.102±0.00 0.127±0.00 0.124±0.00 N/A 0.303±0.00 N/A 0.213±0.00 0.117±0.00 0.335±0.04
ENSG00000131746 ENST00000254051 0.687±0.00 0.052±0.00 N/A 0.010±0.00 5.745±0.00 0.326±0.07 0.043±0.00 0.596±0.00 0.325±0.00 1.811±0.00 N/A 15.636±16.73 15.809±6.64 0.272±0.00
ENST00000394072 N/A 0.286±0.00 N/A 0.054±0.00 N/A N/A N/A N/A 0.016±0.00 N/A 0.008±0.00 0.157±0.00 3.578±0.00 0.095±0.00
ENST00000497303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582747 N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000266088 ENST00000577557 0.145±0.00 0.396±0.00 N/A N/A 0.148±0.00 N/A N/A 0.092±0.00 N/A 0.115±0.00 N/A 0.163±0.00 N/A N/A
ENST00000578280 N/A 1.163±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A 0.100±0.00 N/A 0.122±0.07 0.458±0.39 0.116±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017607 ENSMUST00000017751 1.626±1.12 0.079±0.04 9.366±0.38 0.042±0.01 1.758±0.44 37.170±12.41 0.058±0.03 0.121±0.02 0.042±0.03 0.818±0.50 0.035±0.02 1.863±0.98 10.922±13.63 0.167±0.07
ENSMUST00000107465 0.370±0.07 0.354±0.15 N/A N/A N/A N/A 0.180±0.05 0.512±0.07 0.294±0.07 0.811±0.02 0.098±0.02 1.657±0.00 24.852±20.95 0.795±0.07
ENSMUST00000123303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 2.538±0.00 N/A N/A
ENSMUST00000153351 0.303±0.00 0.217±0.03 N/A N/A N/A N/A N/A 0.205±0.00 0.203±0.03 N/A N/A N/A N/A 0.542±0.07
ENSMUSG00000037944 ENSMUST00000103134 1.090±0.14 0.329±0.10 0.489±0.12 0.020±0.00 56.518±25.15 1.935±0.40 0.914±0.19 2.451±1.98 0.388±0.25 7.222±1.62 0.457±0.76 0.690±0.30 0.150±0.09 0.749±0.00

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