C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipid transfer protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017754 Pltp 10090 - 2:164839518-164857711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059954 Pltp-001 164839518-164857711 protein_coding
  ENSMUST00000109316 Pltp-003 164839518-164857542 protein_coding
  ENSMUST00000109317 Pltp-002 164839518-164857633 protein_coding
  ENSMUST00000128110 Pltp-006 164854310-164857630 protein_coding
  ENSMUST00000142603 Pltp-007 164846813-164856796 retained_intron
  ENSMUST00000148912 Pltp-004 164852473-164857626 processed_transcript
  ENSMUST00000156255 Pltp-005 164852610-164857620 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000059954ENSMUST00000109317
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059954 178.076±3.52 27.001±3.66 119.289±13.33 26.853±0.69 117.470±26.79 31.497±3.06 24.621±5.28 28.478±9.96 338.773±14.40 7.993±0.73 61.407±11.63 66.682±21.63 8.916±1.71
ENSMUST00000109317 N/A N/A N/A 17.884±3.28 59.214±7.04 N/A N/A N/A 143.615±27.74 N/A 30.128±4.74 25.543±0.00 1.658±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GL CIL_0006GL_0002 CGP 2:164830732-164841032
CIL_0006IQ CIL_0006IQ_0003 CGP 2:164832873-164857711
CIL_0006IV CIL_0006IV_0003 CGP 2:164839518-164894454

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0010189 IMP vitamin E biosynthetic process
GO:0030317 IMP sperm motility

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035768 pltp phospholipid transfer protein protein_coding Danio_rerio
ENSG00000100979 PLTP phospholipid transfer protein protein_coding Homo_sapiens

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