C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: A kinase (PRKA) anchor protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018428 Akap1 10090 - 11:88830792-88864586 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018572 Akap1-002 88830792-88864586 protein_coding
  ENSMUST00000107903 Akap1-001 88830792-88851503 protein_coding
  ENSMUST00000107904 Akap1-006 88831755-88863717 protein_coding
  ENSMUST00000143720 Akap1-003 88830792-88851503 nonsense_mediated_decay
  ENSMUST00000153787 Akap1-004 88838972-88844498 nonsense_mediated_decay
  ENSMUST00000153961 Akap1-005 88837012-88841540 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018572ENSMUST00000107903ENSMUST00000107904ENSMUST00000143720ENSMUST00000153787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018572 11.049±5.43 11.185±2.01 13.531±0.72 11.907±4.38 8.304±2.33 11.184±1.36 16.115±2.09 12.579±2.78 11.416±5.23 6.390±1.02 15.012±1.84 9.268±3.03 9.928±4.84 N/A
ENSMUST00000107903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.540±2.69 9.184±4.96 97.802±8.57
ENSMUST00000107904 14.715±3.86 18.707±3.95 3.916±0.07 9.319±2.94 14.986±3.40 17.623±2.48 18.928±3.15 11.509±2.11 7.065±4.33 5.364±0.13 4.565±1.21 18.387±4.68 6.018±2.95 102.873±60.95
ENSMUST00000143720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 101.121±46.28
ENSMUST00000153787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 121.956±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000880 CIL_000880_0002 VISTA 11:88254791-88855816
CIL_00039S CIL_00039S_0002 CGP 11:88339382-88864586

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006062 akap1b A kinase (PRKA) anchor protein 1b protein_coding Danio_rerio
ENSG00000121057 AKAP1 A kinase (PRKA) anchor protein 1 protein_coding Homo_sapiens

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