C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-Coenzyme A dehydrogenase, very long chain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018574 Acadvl 10090 - 11:70010183-70015411 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018718 Acadvl-002 70010244-70015387 protein_coding
  ENSMUST00000102574 Acadvl-001 70010183-70015408 protein_coding
  ENSMUST00000134516 Acadvl-005 70010189-70010911 retained_intron
  ENSMUST00000137187 Acadvl-007 70014043-70015411 retained_intron
  ENSMUST00000145478 Acadvl-003 70014118-70015399 retained_intron
  ENSMUST00000146129 Acadvl-006 70011222-70012574 retained_intron
  ENSMUST00000156733 Acadvl-004 70013189-70015377 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018718ENSMUST00000102574ENSMUST00000137187
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018718 N/A N/A N/A 15.581±0.00 39.955±0.00 N/A N/A N/A N/A N/A N/A 31.376±0.00 28.566±10.32 9.623±0.00
ENSMUST00000102574 83.416±24.92 62.518±13.13 43.052±6.28 12.530±3.02 84.481±25.71 44.295±3.48 276.052±9.04 114.035±4.15 100.080±45.69 33.419±3.47 125.830±9.44 33.633±11.10 21.129±8.75 7.645±2.13
ENSMUST00000137187 N/A 100.857±19.81 N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.671±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZV CIL_0002ZV_0002 CGP 11:70000595-70015411

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001659 IMP temperature homeostasis
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0030855 IEA epithelial cell differentiation
GO:0033539 IMP fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0042645 IEA mitochondrial nucleoid
GO:0045717 IMP negative regulation of fatty acid biosynthetic process
GO:0046322 IMP negative regulation of fatty acid oxidation
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process
GO:0090181 IMP regulation of cholesterol metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016687 acadvl acyl-Coenzyme A dehydrogenase, very long chain protein_coding Danio_rerio
ENSG00000072778 ACADVL acyl-CoA dehydrogenase, very long chain protein_coding Homo_sapiens

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