C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mediator complex subunit 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018923 Med11 10090 + 11:70451919-70453727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019067 Med11-001 70451919-70453727 protein_coding
  ENSMUST00000151013 Med11-002 70451919-70453240 protein_coding
  ENSMUST00000152348 Med11-003 70451932-70453564 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019067ENSMUST00000152348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019067 10.216±0.88 5.699±0.52 8.614±0.33 10.328±1.07 8.599±1.13 9.312±0.91 3.172±1.23 12.016±0.45 8.811±4.43 11.171±0.84 2.603±0.93 11.306±4.40 20.961±5.76 4.074±0.65
ENSMUST00000152348 1.589±0.41 N/A 1.102±0.00 4.208±0.75 1.538±0.43 1.220±0.00 0.663±0.26 N/A N/A 1.840±0.00 0.709±0.26 1.644±0.38 N/A 0.664±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000106 CIL_000106_0002 CGP 11:70432635-70453727
CIL_0001RD CIL_0001RD_0002 CGP 11:70451919-70459984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0008150 ND biological_process
GO:0016592 ISA mediator complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069337 med11 mediator complex subunit 11 protein_coding Danio_rerio
ENSDARG00000086416 med11 mediator complex subunit 11 protein_coding Danio_rerio
ENSG00000161920 MED11 mediator complex subunit 11 protein_coding Homo_sapiens

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