C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 145
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019189 Rnf145 10090 + 11:44518964-44565520 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019333 Rnf145-006 44518964-44565520 protein_coding
  ENSMUST00000101327 Rnf145-001 44519442-44554977 protein_coding
  ENSMUST00000124959 Rnf145-003 44520305-44548925 processed_transcript
  ENSMUST00000127907 Rnf145-002 44518983-44524358 processed_transcript
  ENSMUST00000129676 Rnf145-005 44560019-44561977 processed_transcript
  ENSMUST00000150257 Rnf145-004 44556831-44560037 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019333ENSMUST00000127907
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019333 18.190±9.88 32.767±3.68 38.022±3.43 22.046±18.54 19.582±7.49 19.104±4.23 3.217±0.20 17.919±2.84 18.181±14.37 25.811±1.13 2.768±0.85 17.629±6.28 18.789±7.43 5.205±1.59
ENSMUST00000127907 N/A 115.100±51.39 N/A N/A 67.604±5.61 34.838±1.14 N/A N/A N/A 61.725±14.01 N/A 39.614±6.50 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008O4 CIL_0008O4_0002 VISTA 11:44325594-44926697
CIL_0008X2 CIL_0008X2_0002 VISTA 11:44334332-44935609
CIL_00087L CIL_00087L_0002 VISTA 11:44356475-44957869
CIL_0007UN CIL_0007UN_0002 VISTA 11:44499727-45101437
CIL_00043G CIL_00043G_0002 CGP 11:44518964-45008091

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002609 RNF145 (1 of 2) ring finger protein 145 protein_coding Danio_rerio
ENSDARG00000032373 rnf145b ring finger protein 145b protein_coding Danio_rerio
ENSG00000145860 RNF145 ring finger protein 145 protein_coding Homo_sapiens

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