C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 145
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019333 Rnf145-006 ENSMUSG00000019189 10090 + 11:44518964-44565520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019333 18.190±9.88 32.767±3.68 38.022±3.43 22.046±18.54 19.582±7.49 19.104±4.23 3.217±0.20 17.919±2.84 18.181±14.37 25.811±1.13 2.768±0.85 17.629±6.28 18.789±7.43 5.205±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008O4 CIL_0008O4_0002 VISTA 11:44325594-44926697
CIL_0008X2 CIL_0008X2_0002 VISTA 11:44334332-44935609
CIL_00087L CIL_00087L_0002 VISTA 11:44356475-44957869
CIL_0007UN CIL_0007UN_0002 VISTA 11:44499727-45101437
CIL_00043G CIL_00043G_0002 CGP 11:44518964-45008091

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274542 RNF145-001 protein_coding Homo_sapiens 0 3037
ENST00000424310 RNF145-002 protein_coding Homo_sapiens 0 3116
ENST00000518284 RNF145-007 processed_transcript Homo_sapiens 0 1548
ENST00000518802 RNF145-003 protein_coding Homo_sapiens 0 2287
ENST00000519865 RNF145-005 protein_coding Homo_sapiens 0 3037
ENST00000519985 RNF145-009 processed_transcript Homo_sapiens 0 296
ENST00000520548 RNF145-011 processed_transcript Homo_sapiens 0 496
ENST00000520638 RNF145-004 protein_coding Homo_sapiens 0 2148
ENST00000521606 RNF145-006 protein_coding Homo_sapiens 0 2287
ENST00000553844 RP11-467L19.11-001 processed_pseudogene Homo_sapiens 0 252
ENST00000611185 RNF145-201 protein_coding Homo_sapiens 0 3099
ENST00000616872 RP11-566K19.8-001 processed_pseudogene Homo_sapiens 0 252

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