C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory (inhibitor) subunit 12C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019254 Ppp1r12c 10090 - 7:4481520-4501680 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000013886 Ppp1r12c-001 4481520-4501680 protein_coding
  ENSMUST00000124248 Ppp1r12c-004 4481520-4501361 protein_coding
  ENSMUST00000125220 Ppp1r12c-002 4489811-4501529 processed_transcript
  ENSMUST00000127329 Ppp1r12c-010 4481523-4484032 retained_intron
  ENSMUST00000128857 Ppp1r12c-011 4481799-4483034 processed_transcript
  ENSMUST00000133374 Ppp1r12c-008 4483940-4485314 retained_intron
  ENSMUST00000134738 Ppp1r12c-009 4483634-4484499 retained_intron
  ENSMUST00000136863 Ppp1r12c-007 4484017-4485708 retained_intron
  ENSMUST00000145689 Ppp1r12c-003 4489172-4501664 retained_intron
  ENSMUST00000147679 Ppp1r12c-005 4486151-4486735 retained_intron
  ENSMUST00000153101 Ppp1r12c-012 4481588-4482634 processed_transcript
  ENSMUST00000154710 Ppp1r12c-006 4485206-4485932 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000013886ENSMUST00000124248ENSMUST00000125220ENSMUST00000128857ENSMUST00000145689ENSMUST00000153101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000013886 15.222±7.98 9.681±2.11 21.862±7.37 9.170±2.26 7.209±2.73 20.293±3.47 4.078±1.54 4.270±0.92 3.857±2.10 13.187±3.72 4.156±1.19 7.747±3.28 6.913±1.47 6.979±0.51
ENSMUST00000124248 8.309±1.97 5.235±0.64 12.189±3.14 23.833±20.25 6.201±1.47 N/A 6.309±0.82 4.359±0.79 2.807±1.07 10.920±1.42 3.418±1.42 11.638±8.30 19.417±11.49 7.436±2.37
ENSMUST00000125220 N/A 21.763±9.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128857 N/A N/A N/A 104.898±0.00 N/A N/A N/A N/A 10.338±0.00 N/A 4.715±0.00 99.781±0.00 55.858±8.38 32.762±0.00
ENSMUST00000145689 18.946±3.20 13.164±1.86 N/A 6.421±0.00 8.511±2.92 16.089±4.77 3.889±0.89 2.980±0.18 1.918±0.54 14.696±3.74 N/A 15.262±4.50 N/A 5.112±0.39
ENSMUST00000153101 N/A N/A N/A 104.398±0.00 N/A N/A N/A 7.149±0.00 N/A N/A 5.255±0.00 74.205±41.78 107.242±28.06 139.211±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TI CIL_0004TI_0002 CGP 7:4460674-4501680
CIL_0003RJ CIL_0003RJ_0002 CGP 7:4481520-4516382

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052423 ppp1r12c protein phosphatase 1, regulatory subunit 12C protein_coding Danio_rerio
ENSG00000125503 PPP1R12C protein phosphatase 1, regulatory subunit 12C protein_coding Homo_sapiens

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