C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aryl-hydrocarbon receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019256 Ahr 10090 - 12:35497974-35535038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110811 Ahr-002 35504860-35534623 nonsense_mediated_decay
  ENSMUST00000116436 Ahr-001 35497974-35535038 protein_coding
  ENSMUST00000173414 Ahr-003 35514406-35526779 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110811ENSMUST00000116436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110811 N/A N/A N/A 1.091±0.00 2.280±0.00 N/A 0.739±0.00 N/A N/A N/A 0.402±0.00 1.220±0.00 0.496±0.17 0.090±0.00
ENSMUST00000116436 2.784±0.92 1.339±0.13 11.920±0.01 0.755±0.46 4.248±1.87 3.721±0.51 1.187±0.21 1.669±0.27 4.141±2.13 19.201±1.03 0.322±0.11 5.094±2.07 0.784±0.40 0.219±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IDA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003705 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0004879 IEA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISO nucleus
GO:0005667 TAS transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006805 TAS xenobiotic metabolic process
GO:0008134 IEA transcription factor binding
GO:0009410 IEA response to xenobiotic stimulus
GO:0009636 IEA response to toxic substance
GO:0010468 IEA regulation of gene expression
GO:0030522 IEA intracellular receptor signaling pathway
GO:0030850 IMP prostate gland development
GO:0030888 IEA regulation of B cell proliferation
GO:0035326 ISO enhancer binding
GO:0043565 IDA sequence-specific DNA binding
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045899 IDA positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:0046983 IEA protein dimerization activity
GO:0048608 IMP reproductive structure development
GO:0048732 IMP gland development
GO:0051879 IEA Hsp90 protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020046 ahr1a aryl hydrocarbon receptor 1a protein_coding Danio_rerio
ENSG00000106546 AHR aryl hydrocarbon receptor protein_coding Homo_sapiens

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