C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycogenin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019528 Gyg 10090 - 3:20122084-20155317 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118015 Gyg-001 20122084-20155317 protein_coding
  ENSMUST00000135475 Gyg-003 20122556-20123543 retained_intron
  ENSMUST00000178328 Gyg-201 20122087-20155096 protein_coding
  ENSMUST00000184552 Gyg-002 20122147-20155069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118015ENSMUST00000178328ENSMUST00000184552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118015 3.535±0.06 5.068±1.45 N/A N/A 3.248±0.40 3.709±1.16 N/A 1.740±0.00 0.451±0.00 5.314±0.00 N/A 6.671±1.11 0.389±0.00 0.136±0.00
ENSMUST00000178328 39.038±13.04 32.731±3.47 19.962±0.13 4.733±2.37 45.222±22.13 8.686±1.65 56.419±2.13 14.455±0.66 7.122±3.74 54.800±9.65 173.624±8.61 12.423±4.77 8.023±5.10 1.054±0.41
ENSMUST00000184552 N/A N/A N/A 2.100±0.31 N/A N/A N/A N/A N/A N/A N/A N/A 0.474±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089F CIL_00089F_0002 VISTA 3:19844419-20446014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005536 IEA glucose binding
GO:0005978 IEA glycogen biosynthetic process
GO:0008152 IEA metabolic process
GO:0008466 IEA glycogenin glucosyltransferase activity
GO:0016020 IEA membrane
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011934 gyg1a glycogenin 1a protein_coding Danio_rerio
ENSDARG00000059391 gyg1b glycogenin 1b protein_coding Danio_rerio
ENSG00000163754 GYG1 glycogenin 1 protein_coding Homo_sapiens

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