C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: laminin, alpha 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019846 Lama4 10090 + 10:38965515-39110188 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019992 Lama4-001 38965515-39110188 protein_coding
  ENSMUST00000159506 Lama4-002 38965515-39007396 retained_intron
  ENSMUST00000159580 Lama4-005 38965672-39054519 retained_intron
  ENSMUST00000161303 Lama4-003 38965570-39034249 retained_intron
  ENSMUST00000161992 Lama4-006 39053805-39057667 retained_intron
  ENSMUST00000162211 Lama4-004 38965553-39047246 retained_intron
  ENSMUST00000163036 Lama4-007 39105781-39110097 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019992ENSMUST00000163036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019992 31.136±3.78 12.913±1.23 29.382±0.88 4.343±1.86 22.599±2.18 7.965±0.68 11.519±0.57 2.710±0.21 0.499±0.24 17.702±1.24 2.281±0.38 17.660±4.11 9.608±3.98 0.589±0.09
ENSMUST00000163036 N/A N/A N/A N/A N/A N/A N/A N/A 1.739±0.25 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001568 IMP blood vessel development
GO:0005102 IEA receptor binding
GO:0005576 TAS extracellular region
GO:0005604 IDA basement membrane
GO:0005605 IDA basal lamina
GO:0005606 IEA laminin-1 complex
GO:0007155 IEA cell adhesion
GO:0030155 IEA regulation of cell adhesion
GO:0030334 IEA regulation of cell migration
GO:0045995 IEA regulation of embryonic development
GO:0050873 IDA brown fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020785 lama4 laminin, alpha 4 protein_coding Danio_rerio
ENSG00000112769 LAMA4 laminin, alpha 4 protein_coding Homo_sapiens

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