C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MGAT4 family, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019888 Mgat4c 10090 + 10:101681487-102391469 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020039 Mgat4c-001 102159079-102391469 protein_coding
  ENSMUST00000120748 Mgat4c-002 102374435-102390313 protein_coding
  ENSMUST00000127504 Mgat4c-006 101681641-102378300 protein_coding
  ENSMUST00000130580 Mgat4c-010 102158878-102273543 processed_transcript
  ENSMUST00000134930 Mgat4c-007 101681641-102377681 processed_transcript
  ENSMUST00000138016 Mgat4c-009 102158889-102378227 protein_coding
  ENSMUST00000138522 Mgat4c-008 102158858-102388376 protein_coding
  ENSMUST00000143640 Mgat4c-003 102158905-102273544 processed_transcript
  ENSMUST00000146230 Mgat4c-005 101681487-102013222 retained_intron
  ENSMUST00000156751 Mgat4c-004 101681746-102385088 protein_coding
  ENSMUST00000163753 Mgat4c-201 102158858-102391469 protein_coding
  ENSMUST00000179929 Mgat4c-202 101681487-102391466 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000020039ENSMUST00000120748ENSMUST00000130580ENSMUST00000138522ENSMUST00000143640ENSMUST00000163753
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000020039 N/A 0.006±0.00 0.221±0.12 N/A N/A 0.057±0.02 0.006±0.00 0.056±0.00 0.856±0.40 0.004±0.00 0.006±0.00
ENSMUST00000120748 4.195±2.40 N/A 0.575±0.00 30.629±12.82 N/A 0.019±0.00 0.030±0.02 0.098±0.01 1.363±0.65 0.013±0.01 N/A
ENSMUST00000130580 N/A N/A N/A N/A 0.253±0.15 N/A N/A N/A N/A N/A 113.508±57.18
ENSMUST00000138522 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A
ENSMUST00000143640 N/A N/A N/A N/A N/A 0.199±0.05 N/A N/A N/A N/A N/A
ENSMUST00000163753 0.346±0.00 N/A 2.501±1.38 N/A N/A 0.114±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0005975 IEA carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0008454 IEA alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041791 mgat4c mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) protein_coding Danio_rerio
ENSG00000182050 MGAT4C MGAT4 family, member C protein_coding Homo_sapiens

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